Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03259 ATGAAGAAAGTGGTGCTAAAGGTGGAACTCTATGATGACAAAATCAAGAAAAAGGCTATGAAATCAGTATCTGGTATTTCAGGGGTTGAGTCAGTCTCTGTGGACATGAAGGACCAGAAAATGACCATAATTGGGGATGTTGATCCTGTTGGTGTGGTGGGAAAGCTTAGAAAATTCTGCCATGCTGAGATGCTTTCAGTTGGACCAGCCAAGGAGGAGAAAAAGGAGGAACCCAAGAAAGAGGATAAGAAACCAGATGCCAAGAAAGATCCAAAGGAGGAATATGCTGAACTTCTGAAGATGTATGAAGCATATTACAACCAAACTAGACAGCAACAATATCCATATTACTATTACAGAACAGTGGAAGAGAATCCAAATGGCTGTGTTATTTGCTAA 399 0.4035 MKKVVLKVELYDDKIKKKAMKSVSGISGVESVSVDMKDQKMTIIGDVDPVGVVGKLRKFCHAEMLSVGPAKEEKKEEPKKEDKKPDAKKDPKEEYAELLKMYEAYYNQTRQQQYPYYYYRTVEENPNGCVIC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03259 132 MobiDBLite consensus disorder prediction 68 92 - -
Spst4g03259 132 Pfam Heavy-metal-associated domain 7 52 IPR006121 GO:0046872
Spst4g03259 132 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Spst4g03259 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 129 - -
Spst4g03259 132 Gene3D - 1 73 - -
Spst4g03259 132 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03259 Spst-Chr4 72311133 72311984 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03259 - - gmx:100306444 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03259 4 72311133 72311984 Spst4g03259 4 72311133 72311984 ECH
Spst4g03259 4 72311133 72311984 Spst10g00924 10 10000123 10000868 PCT