Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00924 ATGAATAAAGTTGTGCTAAAGGTGGAACTACTAGATGACAAAATTAAGAAAAAAGCCATGAAGGTCGTCTCCAATATTTCAGGAGTTGAATCAGTGGCAATGGAGATGAAGGAGCAGAAATTAACTTTAATTGGAGACATGGACGCTGTGGTTATAGTGGAGAAACTGAGGAAGCTGTGTTACACCGAGATACTCTCTTTTGGACCCGCGAAGGAAGAGAAGAAGGAAAAGACTAAAGAGGAGAAGAAGCAGACACAGAACAAGAATAACAATGATAATATTTTGAAGGTCTGCGACGCCTACCATAAGCATTATCATTACTCAAGTTATGTAGAAGAGAATCCCAATGCATGTGTGATTTGCTAA 366 0.3907 MNKVVLKVELLDDKIKKKAMKVVSNISGVESVAMEMKEQKLTLIGDMDAVVIVEKLRKLCYTEILSFGPAKEEKKEKTKEEKKQTQNKNNNDNILKVCDAYHKHYHYSSYVEENPNACVIC 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00924 121 Coils Coil 71 91 - -
Spst10g00924 121 Gene3D - 1 73 - -
Spst10g00924 121 MobiDBLite consensus disorder prediction 70 87 - -
Spst10g00924 121 ProSiteProfiles Heavy-metal-associated domain profile. 1 64 IPR006121 GO:0046872
Spst10g00924 121 Pfam Heavy-metal-associated domain 7 60 IPR006121 GO:0046872
Spst10g00924 121 MobiDBLite consensus disorder prediction 70 89 - -
Spst10g00924 121 SUPERFAMILY HMA, heavy metal-associated domain 5 62 IPR036163 GO:0046872
Spst10g00924 121 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00924 Spst-Chr10 10000123 10000868 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00924 - - gmx:100793345 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03259 4 72311133 72311984 Spst10g00924 10 10000123 10000868 PCT