Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03258 ATGGACTTACATGGTGATAGAATGAGGCAAAAAGCTATGAAGACAGCATCTGGACTTTCAGGGATTGACTCAGTTGCTGTTGATGTTAAAGACATGAAATTGGTCTTGTTGGGTGACATTGATCCAGTGAATGCCGTGACCAAGCTACGAAAGTTGTGTCGCACTGAAATAGTTTCAGTTGGACCAGCAAAAGAGGAGAAGGAGGAGCCAGCAATGTTAACTTTTCCTCTAAAATTCAATGAAGCCTATTATCCTCTTTATTATCAGATGACACCACAGAATAGTCAATGTTACTGTTACGATGAGAATCCTAATGGCTGTGTCATCTGCTAA 333 0.4054 MDLHGDRMRQKAMKTASGLSGIDSVAVDVKDMKLVLLGDIDPVNAVTKLRKLCRTEIVSVGPAKEEKEEPAMLTFPLKFNEAYYPLYYQMTPQNSQCYCYDENPNGCVIC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03258 110 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 105 - -
Spst4g03258 110 ProSiteProfiles Heavy-metal-associated domain profile. 1 61 IPR006121 GO:0046872
Spst4g03258 110 Gene3D - 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03258 Spst-Chr4 72302509 72302944 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03258 - - pvu:PHAVU_004G107000g 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03258 4 72302509 72302944 Spst4g03258 4 72302509 72302944 ECH
Spst10g00925 10 10002128 10016127 Spst4g03258 4 72302509 72302944 PCT