Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00925 ATGGGTTTGGGGGAGAAAGGCCATGGCCCACAAGGCCTTGGTGGTTGTAAGGTGAAAGTTGTGTTAAAGGTGGAAGTACATGAAGACAAAATCAAGAAAAAAGCTATGAAGACTGTCTCTGGCACTGCAGGTGTTGAGTCTGTTTCTGTGGATATGAAAGACAAGAAATGGACCTTAATAGGGGACATTGATCCAGTACAAGTAGTTGCCAAGCTAAGGAAGTTTAGCAACACAGAAATAGTTTCGGTTGGCCCAGCAAAAGAGGAAAAGAAGCAAGAACCTAAAAAGGATGATAAAAAGATGGAAGATGGCAGGAAAGATTCAACAAAAGGAAAAATGCCAGATCCACTCACTGTCTATCAAACATCTATTGAAAAAAAAGTTGTGTTGAAGGTGGAAGTACATGAAGACAAAATCAAGAAAAAAGCTATGAAGACTGTCTCTGGCATTGCAGGTGTTGAGTCTGTTTCTATGGACATGAAAGATCAGAAATTGACCTTAACTGGGGACATTGATGCAGTACGAGTAGTAGCTAAGCTAAGGAAGTTTTGTCACACAGAAATAGTTTCTGTTGGACCAGCAAAAGAGGAAAAGAAGGAAGAACCTAAAAAGGATGATAAAAAGAAGGACGATGACAAGAAAGATTCTAAAAAAGAAATCGTCCCAGATCCACTCAAGTTCTATCAAAACTATGCCTACTATTATCAGACGAAACCACAATACAATCCGTATTACAGTGCCATAAGTGTGGAAGAGGATCCTAATGGCTGTGTCATTGTCTAA 783 0.3959 MGLGEKGHGPQGLGGCKVKVVLKVEVHEDKIKKKAMKTVSGTAGVESVSVDMKDKKWTLIGDIDPVQVVAKLRKFSNTEIVSVGPAKEEKKQEPKKDDKKMEDGRKDSTKGKMPDPLTVYQTSIEKKVVLKVEVHEDKIKKKAMKTVSGIAGVESVSMDMKDQKLTLTGDIDAVRVVAKLRKFCHTEIVSVGPAKEEKKEEPKKDDKKKDDDKKDSKKEIVPDPLKFYQNYAYYYQTKPQYNPYYSAISVEEDPNGCVIV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00925 260 Pfam Heavy-metal-associated domain 133 182 IPR006121 GO:0046872
Spst10g00925 260 MobiDBLite consensus disorder prediction 84 112 - -
Spst10g00925 260 Gene3D - 13 89 - -
Spst10g00925 260 Gene3D - 121 197 - -
Spst10g00925 260 ProSiteProfiles Heavy-metal-associated domain profile. 17 83 IPR006121 GO:0046872
Spst10g00925 260 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 19 106 - -
Spst10g00925 260 MobiDBLite consensus disorder prediction 191 221 - -
Spst10g00925 260 ProSiteProfiles Heavy-metal-associated domain profile. 125 192 IPR006121 GO:0046872
Spst10g00925 260 MobiDBLite consensus disorder prediction 83 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00925 Spst-Chr10 10002128 10016127 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00925 - - vum:124842115 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00925 10 10002128 10016127 Spst4g03258 4 72302509 72302944 PCT