Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03224 ATGGGAAGCCGCAACAACACTACCCAGGAGACGGTGAACGCCGCCGCCACCGCCATCGTCACCGCCGAATCCAGAGTGCAACCGACCACCGCGCCGAAAAAACGATGGGGAGGTTGCTGGAGCCAATATTGGTGTTTTGGATCTTGTAAAAGCAGTAAAAGCAGCAAGCGAATTGGCCATGCTGTTCTTGTTCCAGAACCTGTTGCACCAACAGGTCCAGCTGCTGCCGCTGCTGCACCACCAAATCCTTCAACTGCCATTGTAATGCCGTTCATCGCCCCTCCATCTTCTCCTGCATCTTTAATCCAATCTGATCCTCCATCTGCTATTCAATCACCGCCTGGATTACTTTCACTCTCTTCTCTTGCAGCCAGTGCTTACTCTGCTGGTGGTCCTGCATCCATGTTCACCATTGGTCCGTATGCCTATGAGACCCAATTAGTTTCTCCACCCGTATTTTCCAACTTCACAACTGAACCATCCACTGCTCCTTTTACTCCGCCACCCGAATCTGTGCATCAAACAACACCTTCATCTCCTGACGTTCCATTTGCTCAATTGTTGGCTTCTTCACTGGACCGGGCTCGGAAATGTAATGGGAATCAGAAGTTTGCATTATACAATTATGATTTTTTACCTTACCAACAATATCCTGGAAGCCCAGGTGGCCAACTCATATCACCTGGATCGGCAATATCAACTTCTGGCACTTCTACCCCATTTCCTCTTGAATTCCGCAAAGGGGAAACACCAAAGATCTTGGGGTTTGAATACTTTTCTACCCGAAGATGGAGTTCAAGACTAGGATCTGGGTCATTGACACCAGATGGTGCAGGGCAAGGTTCAAGACTTGGCTCAGGATCCGTGACTCCTGATGGTGTTGGGATTGCTTCGAGATTAGGTTCTGGGTGTGTGACACCTGATGGTCTGGGGCAGGAATCCAGGTTAGGTTCTGGCTGTTTGACACCTGATGCTGCTGGGCCTACCAATCAAAATAACATCTCTGTGCAAAACCAAATTTCTAAGGATGCAACTCTTGCTAACTCTGACAATGGACATCCAAGTAATGCAACATTAGTTGATCACAGAGTTTCATTTGAATTAACTGGGGAAGATGTTGCTCGATGTCTTGCAAATAAAACTGGGGTATTGCTTCGAAATATGTCAGGTTCCTCACAAGGTATACTGGCCAAAGACCCTGTTGACAGAGAAAGGGTGCAAAGAGAGGCAGATGCTAACTGTAATGTGTGTACAGAGAAAACAGATGACAAGCCTGAAAATCCTATAGGAGAAGGCGGGCAATGCTTCCATAAGCAGAATTCTGTAAATTCTTCCAAAGAATTCAATTTTGACAACAGTACAGGAGTTGTTTCTGATACTGGTGACAGTGGTTCTGAGTGGTGGACTAACAGGAGAGTTGCTGGGAGGGAAGGTAGATCAGCCAACAGTTGGGCTTTCTTCCCAATGTTACAGACAGAAATGAACTGA 1488 0.4698 MGSRNNTTQETVNAAATAIVTAESRVQPTTAPKKRWGGCWSQYWCFGSCKSSKSSKRIGHAVLVPEPVAPTGPAAAAAAPPNPSTAIVMPFIAPPSSPASLIQSDPPSAIQSPPGLLSLSSLAASAYSAGGPASMFTIGPYAYETQLVSPPVFSNFTTEPSTAPFTPPPESVHQTTPSSPDVPFAQLLASSLDRARKCNGNQKFALYNYDFLPYQQYPGSPGGQLISPGSAISTSGTSTPFPLEFRKGETPKILGFEYFSTRRWSSRLGSGSLTPDGAGQGSRLGSGSVTPDGVGIASRLGSGCVTPDGLGQESRLGSGCLTPDAAGPTNQNNISVQNQISKDATLANSDNGHPSNATLVDHRVSFELTGEDVARCLANKTGVLLRNMSGSSQGILAKDPVDRERVQREADANCNVCTEKTDDKPENPIGEGGQCFHKQNSVNSSKEFNFDNSTGVVSDTGDSGSEWWTNRRVAGREGRSANSWAFFPMLQTEMN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03224 495 MobiDBLite consensus disorder prediction 159 180 - -
Spst4g03224 495 MobiDBLite consensus disorder prediction 270 287 - -
Spst4g03224 495 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 6 493 IPR040420 -
Spst4g03224 495 MobiDBLite consensus disorder prediction 270 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03224 Spst-Chr4 71968435 71972369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03224 - - gmx:100806399 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03224 4 71968435 71972369 Spst10g00941 10 10143839 10144759 ECH
Spst4g03224 4 71968435 71972369 Spst4g03224 4 71968435 71972369 ECH
Spst4g03224 4 71968435 71972369 Spst10g00941 10 10143839 10144759 PCT