Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00941 ATGGAATTCGAGACTTGGAACTGGATCTTTGACACCAGAGAGTACTGGGCAAGGTTCAAGACTAGGCTCAGGATCCTTGATGCTGTTAAGCTAGCTTCACAACTAGGCTCTGGGTGTTTGACACCTGATGGGGTCGCACCAACTGCTAGAAATGCCATCTATGTTGGAAAACAGATTTCTGAGGTAACATCCCTTACGAATTCCGATGACGAGTGTCAACCCAATGCAGCATTAGTGGATCACAGAGTTTCATTTGAGTTACCCGGGGAGGATGTTGCACGATGTCTTGCAAATAAATCAGGATCTTCATTGATTGGAAACATCTCAGGTGAGAAGCCTGAACATTCTACTGGAGAGGGAGAGGAGCAGTGCTGTCGTCACTCTTCTAATTCTTCTAAAGAATTTAACTTTGACTGCAGAAAAGGTGTTGTTTCTGATAATTCTGCCAATGCCTCCGAATGGTGGACTAACAAGAAAATTGTTGGAAAGGAAGATAGATCAAGCAACAGTTCGGCATTTTTCCCAATGACTCGACGTGTAAAGAGGGAGGGTAGTTGTAGACGTGTAAAGAGGGAGGGTAGTTGTAGACGTGTAAAGAGGGAGGGTAGTTGTATATAG 618 0.4434 MEFETWNWIFDTREYWARFKTRLRILDAVKLASQLGSGCLTPDGVAPTARNAIYVGKQISEVTSLTNSDDECQPNAALVDHRVSFELPGEDVARCLANKSGSSLIGNISGEKPEHSTGEGEEQCCRHSSNSSKEFNFDCRKGVVSDNSANASEWWTNKKIVGKEDRSSNSSAFFPMTRRVKREGSCRRVKREGSCRRVKREGSCI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00941 205 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 28 109 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00941 Spst-Chr10 10143839 10144759 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00941 - - gmx:100798631 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03224 4 71968435 71972369 Spst10g00941 10 10143839 10144759 ECH
Spst10g00941 10 10143839 10144759 Spst10g00941 10 10143839 10144759 ECH
Spst4g03224 4 71968435 71972369 Spst10g00941 10 10143839 10144759 PCT