Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03203 ATGGCTTCCGTCACGTGCTCCCCCACCTCCCTCCAGCTTCGATTGGCCTTCGCCGCTCCCAAATTCCCCCTCGCCCCGCACGTGCGAATGCGCAACCTCAACAAGAATCGCGTTCGCCCTCTGCGCGCAGCGCGAGACGGCGCCGCCTCCGAGTGGACCGGGCCCGGGCCCAACCTCGATGACTTCTCCGGCTGGTCCAACACCGAGGCCGAGCAACAGCCCGACAAGAAGAATGAGTCCCATGGAGGAGTTGTGGGAGTAGGAGTGGCTGGAGTGCTTCTTCTTTCAGGGCTTACCTTTGCTGCCTTATCTCTTGGGAAACGAACTGGTTTCAGACCAGAGCAACACATGCAGCCCTTCACTGCACAGCAGGAGGAAATTTTGTCTTCTGATGATCATAATAATGAAACAACAGAACAAGTGAATGTTAACAAAGTGGAGCAAGGAAAGGATAAAACCGAAGGATCCCAGTTGATATATGATAGTAAAAACCCCTCCAATGATGTTGATGATGCCACTAAACATATATCTGTTCAGGGACAGCATGAGTCAGCTTTTGATAACAAGTTAGTTTTTGCCAGTGAAAGTCCAGTGCCACTTGAATTTGAAAATACTGCTGATTCTTTTAATACCTATGGATTTAGAGATTTTGATAGCAACCCTACTGTAGATACAGCAGAATCTGCTGCCAATCTTAAAGAAAACCTATTCAATGTTGATCCAGGAGATCTGCCCAACTATGATGATGCCAAGCCACCACACCATAATACTGACCAGCATGATGAAATAAACAGTTCAAATGGAAGTTTCTCTGCTGAGGTAAATGAGCCATCCTTTGAAGAGCGGAGCATTCCTGGAAATGATGTGTTTGAAAAATCATCCGTTTCATCATCAGCCAATACACTGGTGAATGACCTGGGTATAAATGATACTTATGAGGTTGATGAAGTTAAATCTGAATCTCCAAATTCTGGATCCTTTTTCTCTGTTCCTGGTATTCCCGCTCCATCAGTAGTTTCTGCAACTGTACAAGTGCTTCCGGGAAAGGTTTTGGTTCCTGCAGCTGTTGATCAAGTTCAGGGGCAAGCACTAGCTGCACTGCAAGTTTTAAAGGTCATTGAGCCTGATGTTCAACCTAGTGATTTATGTACACGTCGGGAATATGCCCGCTGGTTGGTGTCTGCTAGTAGTGCTCTTTCAAGGAGCACTGTTTCGAAAGTGTACCCTGCCATGTATATAGACAATGTTACTGAGCTTGCATTTGATGATGTCACCCCTGAGGACCCTGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAGAGCAGGCTTTCAAGACGTGATATACAGTTGTCTTCTGATGAAGATGATAGCCCATTTTACTTCTCCCCTGGAAGTCCTTTATCACGTCAAGATCTTGTCAGTTGGAAAATGGCCCTGGAGAAAAGACAGCTTCCAGAAGCCGATAGAAGGATGCTGTACCAACTTTCTGGTTTTCTGGACACTGATAAGATACATCCTAATGCATGCCCTGCCCTAGTGGCTGATCTATCTGCTGGCGAGCATGGAATAATAGCTCTTGCATTTGGTTATACAAGATTATTTCAGCCGGATAAACCAGTAACAAAAGCTCAAGCAGCTATGGCTCTGGCTACTGGAGAAGCTTCTGAAATAGTTAGTGAAGAGCTTGCACGCATTGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCGCATAGTGCTTTAGTAGCTCAGGTAGAGAAGGATATCAATGCAAGTTTTGAGCAAGAGCTTTTCATAGAGAGGGAAAAGATTAATGCTATTGAAAAAATGGCTGAGGAGGCAAGACTTGAGTTGGAAAAGATAAGAGCTGAGAGAGAAGAAGATAACCTTGCATTGACAAAGGAGCGTGCTGCTATTGACTCAGAAATGGAGGTTTTTTCAAAGTTAAGACATGAGGTTGAGGATCAATTACAAAGCCTTATGAATGACAAGGTAGAAATAGCACATGAAAAAGAGAGGATTAACAAACTCCGGGAACAAGCAGAAGTTGAAAACAAGGAGATTTCCCGTTTACAATATGAACTAGAGGTAGAACGAAAAGCCCTGTCTATGGCCAGGGCTTGGGCAGAGGATGAGGCCAAACGAGTGAGAGAGCAAGCAATAGCATTAGAGGAGGCTAGGGATCGTTGGGAGAGGCATGGAATCAAAGTGGTAGTTGATGATGAGCTCCGCAAGGAGGCCTCGGCTGGAGTTACATGGCTCAACGCCTCAGAGCAGATCTCGGTTCAAGGAACAGTTGACAGGGCCAAGAACTTATTGGACAAGCTCAAACAAATGGCAGCAGATGTCAGAGGAAAATCCAGAGACACACTTGACAAAGTCATCCACATGATTTCCCAATTTATTTCAAAATTGAAGGAATGGGCATTCAGAACAGGAAAACAAGCTGAAGAATTTGGAGAAGCTGCCATCTCAAAGGTAGGTAAGTCAGCCAATGAATTGCAACAAAGTGCCATTGAAGTTGGATTTGGTTTCAAAGATGGTGCAAAGCGAGTTGCTGGTGATTGTAGAGAAGGTGTTGAGAAAATCACTCAAAAATTCACACAGAAGTTCAAGACCTGA 2634 0.4491 MASVTCSPTSLQLRLAFAAPKFPLAPHVRMRNLNKNRVRPLRAARDGAASEWTGPGPNLDDFSGWSNTEAEQQPDKKNESHGGVVGVGVAGVLLLSGLTFAALSLGKRTGFRPEQHMQPFTAQQEEILSSDDHNNETTEQVNVNKVEQGKDKTEGSQLIYDSKNPSNDVDDATKHISVQGQHESAFDNKLVFASESPVPLEFENTADSFNTYGFRDFDSNPTVDTAESAANLKENLFNVDPGDLPNYDDAKPPHHNTDQHDEINSSNGSFSAEVNEPSFEERSIPGNDVFEKSSVSSSANTLVNDLGINDTYEVDEVKSESPNSGSFFSVPGIPAPSVVSATVQVLPGKVLVPAAVDQVQGQALAALQVLKVIEPDVQPSDLCTRREYARWLVSASSALSRSTVSKVYPAMYIDNVTELAFDDVTPEDPDFSSIQGLAEAGLIESRLSRRDIQLSSDEDDSPFYFSPGSPLSRQDLVSWKMALEKRQLPEADRRMLYQLSGFLDTDKIHPNACPALVADLSAGEHGIIALAFGYTRLFQPDKPVTKAQAAMALATGEASEIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELFIEREKINAIEKMAEEARLELEKIRAEREEDNLALTKERAAIDSEMEVFSKLRHEVEDQLQSLMNDKVEIAHEKERINKLREQAEVENKEISRLQYELEVERKALSMARAWAEDEAKRVREQAIALEEARDRWERHGIKVVVDDELRKEASAGVTWLNASEQISVQGTVDRAKNLLDKLKQMAADVRGKSRDTLDKVIHMISQFISKLKEWAFRTGKQAEEFGEAAISKVGKSANELQQSAIEVGFGFKDGAKRVAGDCREGVEKITQKFTQKFKT 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03203 877 Coils Coil 710 737 - -
Spst4g03203 877 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 871 - -
Spst4g03203 877 MobiDBLite consensus disorder prediction 44 82 - -
Spst4g03203 877 MobiDBLite consensus disorder prediction 262 276 - -
Spst4g03203 877 Coils Coil 654 698 - -
Spst4g03203 877 MobiDBLite consensus disorder prediction 236 292 - -
Spst4g03203 877 Coils Coil 608 640 - -
Spst4g03203 877 MobiDBLite consensus disorder prediction 247 261 - -
Spst4g03203 877 Coils Coil 770 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03203 Spst-Chr4 71705901 71712386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03203 - - aprc:113867512 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03203 4 71705901 71712386 Spst10g00953 10 10250804 10264351 PCT