Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00953 ATGAGTGATTGCCCAAGTGCCCTATCAAATGTGCTTTCAGTTAAGCCATGCTATAAGTTGGGGGTGTTGTTTCCTAAGCTTCCCTTGGAAGATTTGAACACCAAGCACCTGCGTAGAATTCAACCAAGTCTCGTAGCGTTTGAACAGATGGCATCGATCACTGCCCCCAACTCTCTCCAAATTAGATTGGCTTTCGCTCACTTCAATACCACCAAATTAAACCCAGTTCTTTTCCACACGCGCCTCCCCCACGTTGATCGTCCTCGTCGCGTTTGCCTTTCCTGCGTTGCAAATCACGGAAACGGATCGGACTCTGCTTCCGTTCGGGTCGGGTCGGATGGCTTGTCAGATTCGGAGATTAAGAAGAACGACTCGTATGGAGGAGTTGTCGGAGTGGCTGGTATTGTTCTTCTTTCAGGGATTGTTTTTGCGTCCTTCCTTGTAAGCAGGCGAAACTGTGCCAGACAAGTGAATCCCCTGGCTACACATCAGGAAGTGCTTTTGTCTTCTGATGATTGTAATGACAAAATAGAACATGCAAATACTGACAACAAGGTGGAGCAAGGAAATATTATTGTGGAATGTCGGATAAACATATTCGGGGATTGTTCATCTTCTGAGTCTGATAAGTACACTGATGCCACTACATACATATCCATTCAAAAAGAAGTGCAGCATGGATCAGTTGTTCCCAGTGAGGGCACAGTGGCACTTAATGATCCTGAATCTGAAAATTCTATTGATTCTTCAGATAGTTATAGCTTTAGAGATTTGGATAGCAGTGTTTTTTTGGATACAGAAATCTCTATTACTGAACTCAAGGAGAACTCATCCTTTGTTGAACAAGGAAACATATCCAACTTTGATGCAGAACCCCTACCTGTTATAAGTGAGCAGCGCGATGCAATTACTGGTTCAAGTGGCAATGAAAGTTCTGCTATTTCAAATACTTCAAGTTTTGAGACTGATAAGGAAAGTGTACTTGTCAATATTGCATTCAGTACTCAATCAAATGAAAAAACTTCAGATCCTGAGGTTTTTCCTGAAGAGGATGATTCATCAGTTTCAACCAACGAAAATCTCGATCTGAACAACATGCTACAGGTCATAGACAAGTCATCCTTGGAGGAGTGGAACTTGTCAGAAAATGAGATATATGAATCTCCAAATTCTGCACCCTTTTACTCTACTCCTGGTATTCCTGCTTCATCAGTAGTTTCTGCCGCCGTACAGATGCTTCCTGGAAAGATTTTAGTTCCTGCAGCTGTCGATCAAGGTCAGGGACAAGCATTAACTTCTTTGCAAGCTCTAAAGGATCTTGTTAGTTGGAAAATGGTCCTTGAGAAAAGACAGCTTCCAGAAACAGATGGAAAGATGCTGTACCAACTTTCTGGTTTTATAGATGCCGATAAGATTCACTCTGTTGCACTCCCTGCACTTGTTGCTGATGTATCTACTGGGGCGCAGGGAATAACAGCTCTTGCATTTGTGACAAAGGCCCAAGCAGCTGTAGCACTTGCTACTGGAGATGTTTTTGACTTAATTAATGAAGAGCTTGCGCGCATTGAGGTAGAATCTATGGCTGATAATGCTGTTGTTTCTCATAGTGCTTTAGTAGCTCAAGTTGAGAAGGATATCAATGCAAGTTCTGAACAGAAGTTTTCCGTAGAGAGGGAAAAGATCAATGTTGTTGAAAGAATGAGGCAAGCTGAACGAGCTGCTATTGAATCAGAAAGGAACGTTTTTTCTAAGTTAAAGCATGAAGTGGAAGATCATCTACAAAACCTTATTAGTGACAAGGTTGAAATAGCTTATGAAAAAGAGAAGATTAGTAAGCTTCGGGAGTTAACAGAAAATGAAAAGAAGGAGATTACACGATTACAATATGAGCTAGAGGTTGAACGGAAAGCTTTGCCAATTGCCACTGCATGTGCAGTGGCTTTGGAGAGGGCTAGAGATCATTGGGGGAGGAATGGAATCAAAGTAGTTGATGATGACTTCCGTGAGGACTCTGCAGGGGAGCAGTTCTCGGTTCAAGAAGTTGTTGACCGAGGTGACAGTTTACTGGACAAGCTAAAAAAAATGGCAGCAGGTATTGAGAGAATGGGCGTGTGCAAAACTGGAAAACAAGCAGAAGAATTGAGAGAAACTGCGATCTCAAAGGTAGGCAAGTCGGTTCACAAGGTGCAGCAAAGAGACTTGGAATTTGGATTTACTATCAAAGAAGGGGCAGAGCGAAATGCAGGTGGTTGTAGAGAAGGATTTGAGAAGCTCACTCAAAAGTTAAAGACTTGA 2295 0.424 MSDCPSALSNVLSVKPCYKLGVLFPKLPLEDLNTKHLRRIQPSLVAFEQMASITAPNSLQIRLAFAHFNTTKLNPVLFHTRLPHVDRPRRVCLSCVANHGNGSDSASVRVGSDGLSDSEIKKNDSYGGVVGVAGIVLLSGIVFASFLVSRRNCARQVNPLATHQEVLLSSDDCNDKIEHANTDNKVEQGNIIVECRINIFGDCSSSESDKYTDATTYISIQKEVQHGSVVPSEGTVALNDPESENSIDSSDSYSFRDLDSSVFLDTEISITELKENSSFVEQGNISNFDAEPLPVISEQRDAITGSSGNESSAISNTSSFETDKESVLVNIAFSTQSNEKTSDPEVFPEEDDSSVSTNENLDLNNMLQVIDKSSLEEWNLSENEIYESPNSAPFYSTPGIPASSVVSAAVQMLPGKILVPAAVDQGQGQALTSLQALKDLVSWKMVLEKRQLPETDGKMLYQLSGFIDADKIHSVALPALVADVSTGAQGITALAFVTKAQAAVALATGDVFDLINEELARIEVESMADNAVVSHSALVAQVEKDINASSEQKFSVEREKINVVERMRQAERAAIESERNVFSKLKHEVEDHLQNLISDKVEIAYEKEKISKLRELTENEKKEITRLQYELEVERKALPIATACAVALERARDHWGRNGIKVVDDDFREDSAGEQFSVQEVVDRGDSLLDKLKKMAAGIERMGVCKTGKQAEELRETAISKVGKSVHKVQQRDLEFGFTIKEGAERNAGGCREGFEKLTQKLKT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00953 764 MobiDBLite consensus disorder prediction 231 252 - -
Spst10g00953 764 MobiDBLite consensus disorder prediction 238 252 - -
Spst10g00953 764 MobiDBLite consensus disorder prediction 334 358 - -
Spst10g00953 764 Coils Coil 610 630 - -
Spst10g00953 764 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 119 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00953 Spst-Chr10 10250804 10264351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00953 - - gmx:100801281 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00953 10 10250804 10264351 Spst10g00953 10 10250804 10264351 ECH
Spst4g03203 4 71705901 71712386 Spst10g00953 10 10250804 10264351 PCT