Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03199 ATGCCGTGCTCTTCCTCCACTTCCACTACCACTGGCGATAACAGCAGCAGCAGCAACAACAACAACAAGAATAGAAATGATTCTTCTTGTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTTCTAGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGTTCTCATCGCCATCTTCGATTCTGGTGTAGACCCAGCTGCTGATGGATTACATATTACCTCAGATGGGAAACCAAAAGTTCTCGATGTCCTTGATTGCACAGGGAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCGTATTACTGGGGCATCAGGGGCATCATTGGTTATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTTTAAATTGGTTTATGAGCTATTCACAGAAGATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTAAAACAACTTGCTGATTTTGATCAGAAACACATCAAGGTGGAGGATGTACAACTTAAAAGGGCACGGGAAGATATCCAGAATAGACTTGATATTCTGAGAAAGCAATCTGAGAGCTATGATGATAGAGGGCCGGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTTGACACGCAGAGTCTGGAGGATGATCCAAATAGTGGAAAGCTTGAGCAACTTAACAAGATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCCTGTACATTTGTTGTTAATGTTTATAATGATGGGAATGTCTTGAGTCTCGTAACAGACTGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACCGCTTTCCATCCAAAGGAGCCCTCATTGAATGGAGTAGCACCTGGTGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCCTAGGTTCAATGGAAACAGGAACTGGTTTGATTCGTGCACTGATCACAGCTGTGGAGACTTTTAATGATGGGCATTCTACATTTCCTTTTCAGCATAAGTGTGACCTGATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTATGGGCGCTTTGTTGACCTTGTGAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACTTCTTCAAGTATTATAGGTGTTGGTGCATATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCTTCCGATGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCTGGTGGTGCTGTTGCTCCTGTTCCCACGTGGACTCTTCAACGGCGGATGCTCATGAATGGGACATCAATGGCATCACCGTCAGCCTGTGGAGGAACTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGAATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATTTACCTGAGGATAAATTATCTACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATGTTCCATATCCTTCATCAAGAGGCATCTACCTTAGGGAGGCTAGTGCTTGCCGTCAATCTACTGAGAATGAATTAAAGATGGGAAAACCAATTACTGATGATGATTTGTACTTGGATCCAATCTTGGTTTTCCTTCCCCCATCCCTATCTTGGACAGTTAAAGTTAATCCAAAATTTCATGAAGATGCCGACAACTTAGAGGATCTGGTTTCATTTGAGGAGTGCATTGAATTACATTCTACAGAAGAGGCAGTTGTGAAGGCCCCTGACTATCTATTGCTCACTCATAATGGTCGCACCTTCAATGTTGTGGTCGATCCTTCCACTCTTGGCGATGGTCTACATTATTTTGAGGTCTATGGTATTGACTGCAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCCAAGGCTGGGTCATACTTGACTTCAACACTTTCAGTTATTTGCTTTTGGTTTGTTGGTTCACTAGGCAATATAGAAAGGAGATACATTGAAGTGCCGCCTGGGGCAACTTGGGCCGAAGCAACAATGAAAACATCAGGTTTTGACACAGCACGAAGATTTTATATTGATGCCGTTCAGCTATGCCCATTACGAAGACCTTTGAAATGGGAGGCTTCTGTAACTTATCCCTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGCGGTCAAACAATGGAACTAGTCATTTCCCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATGAAGATGTTATACTTGATGGTAGTGAGGCACCAGTTAGGATTGATACTGAAGCTCTACTGGTATCAGAGGAACTTGCACCTGTGGCAATTCTAAACAAGATTAGGGTCCCATATCGACCAGTAGATTCTAAGATTAGTGCACTTTCAACAGATCGGGACAAACTTCCTTCTGGAAAGCAAATACTGGCGTTGACTTTGATCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACTTACCATTGTTAAATGACCGCATATATGACACTAAATTTGAGTCTCAATTTTACATGATTTCTGACTCAAACAAGCGCATATATTCAAGAGGAGATGTCTATCCAAGCTCTTGTACTCTTCCCAAAGGAGAATATACTCTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTTTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTCATTCGGTTAAGCTTTTTCTCTCAACCGGATGGTCCACTGGTGGGAAATGGTTCCTTTAAGTCCTCATCACTTGTTCCAGGTATAAAAGAAGGATTCTATATTGGTCCACCACCAAAAGAGAAGATTCCCAAGAATTCTCCACAAGGATCTGTGTTGCTAGGAGCAATTTCTTATGGGAAGCTATCATTTGCTGGTCAGGAAGATAATAAAAATCCTGAAAAGCACCCTGCATCGTATAAAATTTCTTATATAGTTCCCCCAAATAAGATTGACGAGGACAAGGGAAAAGGTTCTTCCTTATCTTCCAAGAAGAATGTTTCAGAACGATTAAACGAAGAGGTAAGAGATACAAAAATAAAAGTTCTAGCAAGCCTAAAACAAGAAACTGATGAAGAGCGCTTGGAGTGGACAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCGTTACTTGCAACCATTTTGGAAGGTTTAGTTTCTAGGAGTAATGTCAAAGACAAAATTCATCATGATGACGAGGTGATCGGTGCAGCCAATGAAGTGATTAACAGTATTGACACAGAAGAGCTGGCAAAATTTTTTGCACTTAAAAATGATCCAGAAGAGGAAGAAGCAGAGAATATCAGGAAAAAGATGGAGTTAACCCGAGATCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGGACGTAGATAAGTCCCCAACTTTGGCTGCCACAGAAGAGGCAAAAGGAGGCTTAGACAAAAAACAAACTACAGATGATAGCAGAGATTTGTTTGAAGAGAATTTTAAAGAACTGAAGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATGCTCTTAGTAACACGTGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAAAAGAAATTCTACGATCTAAAGCTGTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTACATATGAGAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTTTTCTAG 4050 0.4267 MPCSSSTSTTTGDNSSSSNNNNKNRNDSSCLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGVLIAIFDSGVDPAADGLHITSDGKPKVLDVLDCTGSGDIDTSKVVKADADGRITGASGASLVINTSWKNPSGEWHVGFKLVYELFTEDLTSRLKKERKKKWDEKNQEEIAKAVKQLADFDQKHIKVEDVQLKRAREDIQNRLDILRKQSESYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLEQLNKIERKYGVFSKLDACTFVVNVYNDGNVLSLVTDCSPHATHVAGIATAFHPKEPSLNGVAPGAQIISCKIGDSRLGSMETGTGLIRALITAVETFNDGHSTFPFQHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPYPSSRGIYLREASACRQSTENELKMGKPITDDDLYLDPILVFLPPSLSWTVKVNPKFHEDADNLEDLVSFEECIELHSTEEAVVKAPDYLLLTHNGRTFNVVVDPSTLGDGLHYFEVYGIDCKAPWRGPLFRIPITITKPKAGSYLTSTLSVICFWFVGSLGNIERRYIEVPPGATWAEATMKTSGFDTARRFYIDAVQLCPLRRPLKWEASVTYPSPAAKSFAFRVVSGQTMELVISQFWSSGIGSHETASVDFEVVFHGIKVNEDVILDGSEAPVRIDTEALLVSEELAPVAILNKIRVPYRPVDSKISALSTDRDKLPSGKQILALTLIYKIKLEDGAQIKPHLPLLNDRIYDTKFESQFYMISDSNKRIYSRGDVYPSSCTLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLVGNGSFKSSSLVPGIKEGFYIGPPPKEKIPKNSPQGSVLLGAISYGKLSFAGQEDNKNPEKHPASYKISYIVPPNKIDEDKGKGSSLSSKKNVSERLNEEVRDTKIKVLASLKQETDEERLEWTELSALLKSEYPKYTPLLATILEGLVSRSNVKDKIHHDDEVIGAANEVINSIDTEELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKDVDKSPTLAATEEAKGGLDKKQTTDDSRDLFEENFKELKKWVDVKSAKYGMLLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLATYERQWMHVRFPPSLPLF 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03199 1349 FunFam Tripeptidyl-peptidase 2 homolog 225 565 - -
Spst4g03199 1349 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 45 534 IPR034051 GO:0006508|GO:0008240
Spst4g03199 1349 SUPERFAMILY Subtilisin-like 45 566 IPR036852 GO:0004252|GO:0006508
Spst4g03199 1349 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Spst4g03199 1349 FunFam Tripeptidyl-peptidase 2 1093 1349 - -
Spst4g03199 1349 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Spst4g03199 1349 PRINTS Subtilisin serine protease family (S8) signature 65 84 IPR015500 -
Spst4g03199 1349 PRINTS Subtilisin serine protease family (S8) signature 292 305 IPR015500 -
Spst4g03199 1349 PANTHER PEPTIDASE S8 39 970 - -
Spst4g03199 1349 MobiDBLite consensus disorder prediction 1 27 - -
Spst4g03199 1349 FunFam tripeptidyl-peptidase 2 isoform X1 48 133 - -
Spst4g03199 1349 Coils Coil 1194 1214 - -
Spst4g03199 1349 Gene3D Peptidase S8/S53 domain 225 562 IPR036852 GO:0004252|GO:0006508
Spst4g03199 1349 Pfam Subtilase family 65 535 IPR000209 GO:0006508|GO:0008236
Spst4g03199 1349 Pfam Tripeptidyl peptidase II 850 1034 IPR022229 -
Spst4g03199 1349 FunFam Tripeptidyl-peptidase 2 109 170 - -
Spst4g03199 1349 Coils Coil 195 222 - -
Spst4g03199 1349 Gene3D - 1093 1349 IPR046939 -
Spst4g03199 1349 Gene3D - 109 181 - -
Spst4g03199 1349 ProSiteProfiles Serine proteases, subtilase domain profile. 50 555 - -
Spst4g03199 1349 MobiDBLite consensus disorder prediction 1 28 - -
Spst4g03199 1349 Gene3D - 563 712 IPR046940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03199 Spst-Chr4 71649745 71668461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03199 K01280 - gmx:100798235 2253.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03199 4 71649745 71668461 Spst4g03199 4 71649745 71668461 ECH
Spst4g03199 4 71649745 71668461 Spst10g00959 10 10321841 10330690 PCT