Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00959 ATGAAGGAAGCTAGGGTTGAAGTGCATGACAACGTGCAGATTTTGGAAAAGATGAAGCAGCTGTTGTTATTCATTGAGCGAAATTTAGAAGAGAAGGTAGTGAAGTGCATCACATTCTGCAAGACCGTGTATCCCGATATCATTCGATTATGCTTTTTCTCTGAACCTGATGCTCCAGTGATGGGAAATGGTTCCTTTAAGTCCTCAACGTTAGTTCCAGGGTATGTAACTGGATCTGTGTTGGTGGGATCAATATCATATGGGAAACTATCATTTGCTGGTCAACATGATGGTAAAAATCCAGAAAAGCATCCTGTGTCACACCGGGTTTCTTATATCATTCCCCCAAATAAGGTCGATGAGGACAAGGGAAAAAATTCTTCCTTATTTTCCAAGAAGACAGTTTCTGAACGCTTAGAACAAGAGGTACGAGATGCAAAAGTAAAAGTGTTAGGGGGTCTAAACCAAGGAAGCGAAGAAGAGTGCTTAGAATGGAAGGAGTTGTCTGCCTCGCTCAAAACTGAATATCCAAAGTACACACCATTACTTGCGAAGATTTTAGAAGGTTTAGTTTCTAGAAGTTATATCAAAGACAAATTTCTTCATCATGAAGAGATAATTGATGCAGCAAATGAGGTTATTGACAGTATTGATAGAGAAGAGTTAGCAAAGTTTTTTTCACTAAAAAATGATCCAGAAGATGAGGAAGCAGAGAAAATCAAGAAAAAGATGGACTCAACCCGCGATCAGTTGGCAGAGGCACTTAACCAAAAGGGGCTTGCACTGGCAGAAATTGTGTCTTTAAAGGAGGTAGATGAGTCCTTGGCTTCGGTTGCAACAGAAGGTGCAAAACAAGACGTTGAGAAAACTGATGAGCAATCCAAGGATGAGGGCGTTCATCCAGACTTGTTTAAAGAGAACTTCAATGAACTGAAGAAATGGGTTGATGTCAAGTGCACAAAATATGGAATCCTCTTGGTGACAAACGAGAGGCGTAATCAAAGGCTTGGGACAGCATTGAAGATTCCAATGTTCATCTCCCTCCCAAAAAGGGATTGCAACAAGCATATTTTTGAGTTGCGCAATTTTGGTGAAATAGTAGTGCTATCTGTTCCGGTGGATGCCTGGTATCTGTATATGGTTGAAGATAATCATGGCACCACTGCCGAAGTGGTTCTGAATGACATCATTCAAGATGATCCCGAGTCTGCCAAGAAGAAATTCTATGAACTAAAGCTCTCTTTGCTTGAGGAAATTGGATGGAGTCATTTTTGTACATATGAGAGGGAATGGATGCTGGTTAAAGAAAATCCGAGCCAAGAGCCTAGAAGGAGAGTTCTATTCTAA 1347 0.4068 MKEARVEVHDNVQILEKMKQLLLFIERNLEEKVVKCITFCKTVYPDIIRLCFFSEPDAPVMGNGSFKSSTLVPGYVTGSVLVGSISYGKLSFAGQHDGKNPEKHPVSHRVSYIIPPNKVDEDKGKNSSLFSKKTVSERLEQEVRDAKVKVLGGLNQGSEEECLEWKELSASLKTEYPKYTPLLAKILEGLVSRSYIKDKFLHHEEIIDAANEVIDSIDREELAKFFSLKNDPEDEEAEKIKKKMDSTRDQLAEALNQKGLALAEIVSLKEVDESLASVATEGAKQDVEKTDEQSKDEGVHPDLFKENFNELKKWVDVKCTKYGILLVTNERRNQRLGTALKIPMFISLPKRDCNKHIFELRNFGEIVVLSVPVDAWYLYMVEDNHGTTAEVVLNDIIQDDPESAKKKFYELKLSLLEEIGWSHFCTYEREWMLVKENPSQEPRRRVLF 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00959 448 Gene3D - 133 361 IPR046939 -
Spst10g00959 448 Gene3D - 372 442 IPR046939 -
Spst10g00959 448 MobiDBLite consensus disorder prediction 284 300 - -
Spst10g00959 448 MobiDBLite consensus disorder prediction 280 300 - -
Spst10g00959 448 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00959 Spst-Chr10 10321841 10330690 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00959 K01280 - gmx:100787184 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00959 10 10321841 10330690 Spst10g00959 10 10321841 10330690 ECH
Spst4g03199 4 71649745 71668461 Spst10g00959 10 10321841 10330690 PCT