Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03185 ATGTTTAAGTCACGGAGCAAGAAAAATAGGATTAAAGCTGTATTCAAACTTCAATTTCAGGCTACTCAGGTGCCAAGGATGAAAAAATCTGCACTGAAGGTAGCTTTGGTACCTGATGATGTTGGGAAGCCTACGGTGAAACTAGAGAAAGTTGCTGTCCAGGATGGAACCTGTTCATGGGAGAATCCGATTTTTGAATCGGTTAAATTCGTTAGGGACACGAAATCAGGAAAAATTCAAGAGAAAATCTACCATTTTGTTGTTTCAACTTCTAATCGTTATAGGTTCTTGCAGGGATCTTCAAAGTCTGGCTTTCTTGGAGAATCCTCAATCGACTTTGCTGATTTTGCTGCAGAAACTGAGCCATTGACTGTATCCCTACCTCTGAAGTTTGCCAATTCAGGCGCAATCCTACATGTGACAATTCAGAATGTGGAAGGGGTGCAGAGAGATCAAAGTACTTACAGAAACGGGGAAGATAATGGAAATGGAAGCTCAAGACACCTACTGAGCATTTGCAGTGCAGATGAAGGTTCTCGTAATGTCAGTGAAGATGGGAACCTGACTTTTAAAGCCTCTAACGGCGTCACTCCTGTGGGAACTCTATGGCAGGATTTTCCCAAGCTATTACCACCCTTGAGGCAAAATTCAATGCCGTCAAAAGGAACTATTGAGGCCATTGCAACAAGAGCTCAAATACATAGGGGGTCACTGGGTTCAGCATCAGATAGGAATTTAGGTGACTTCTGGAGGAACAGCCTGGAAGATACTCTTCCTCGAGAAAGATTACAAGAGCCTTCAGATAATGTCATCGAAAACCTCCGAAGTGAAATTGCTTCTCTAAAGAGGAAAGCAGAAGAATCAGAACTAGAGTTACAATCGCTTCAGAAGCTGGTTGAGAAGGAATGCAGTCAAGGACAAAGTATGTCAAGACAAATAATGAACCTCAGAGAGGAGAGAAATATGATCAAAACTAAATATGAGCAGCTAATGTGCCAGCAAAACCTCAATGAGACCAAAAATTCAAAAGTCTTACAGACTGAGATTGAAGATGCTAGGCTGCAGTTAGAAGCAATAAAAGAAGAGCTTGCTTATGAAAAAGAGTTTAGTTCTAACCTTCAATTGCAACTCCATAAGAGACAAAACTCAAACTCTGAACTACTTTTAGCAGTGAGAGAACTTGAAGCAATGATGGAACATAAGAATAAGGAATTGTTGGACAATAATAAAGAGCATGATGATGCCACAGAATTAGGTCACTTGAAGCAGAAAATTGCAGACCTGAATGGTGAAATAGACATTTATTATAAGCAACGTGAACAGCAAACTGAGCATATAGAAGAGCTCAACTTTGAGTGTGAGCTTCTGAAGAAAGAAAACCTGAATATCTCTTTGAGATTTAAACATGAAGAAGCACAACAAATTGTGTTACAAAATAAACATTCAGCTTCTTTGGCAACTATAGAACAACTTGAATCCCAAGTACGGAGATTAGAAGAAAAGATAGAGAAGCAGGCAGATGATTTTTCAGGCTCATTTATTTACATCAATGAACTTGAAAATGAAGTCAGTGGTTTGAAGAGAGAATTGAAAACACAAGCAGAAGAATTTATAAAAGATTTGCAAGCCATGAAATGTGCAAAACTTGAGCAGGAAGAACGGGCCATCCAAACAGAGGAGACTTTGATAGAGACTAAACACAACAATGATCTCACATGTCAGCGTTTTCAGGATGAATATAGAAGTCTTTTAGTTGAAATGACACTGAAAGTAGAAGAACACGAAAAGAAGTCCATGGAAGCTTATCAAGAAGCTAATGAATTGCAGAATCAGAACAAATTTATGGAAGAAATTGTCCAGAAATGCAATCAAGAGATTAGGGTTATTACAAATCAGAATGAATTGAAACTTCAACAGCTCTTGAACCAAATGGATTCAAAAGAAAAGAAAGTGGAAATGATGTCACAAGAACTAGAGATTAACTCCAAACAACTTGATGATGTACAAAGGCACAGGGATGAAAAGGATAAGGCATTAACAAAGCAAATTCAAGTGCTCAGAATTGAAATTAGAAAGCTGATGCTAGAGGAGTATGCATTGTCTAAAGCTGATCCAACAGAGCACATGTTAATGCAAGAGAAAAATGATGAGGAGATAAGGTTTGACACCCTAATGTCAGAAGTAGAAATCTTTAAGACTCAGCACGATGAATTAAAACATAACTTGCATGTGGAACAAGCAGAGAAAGAAAATATGAAGGAAAAAATATCTCAATTAGAAGAAGAGGTTAAGAAGAAGGAAGAAGAGCTAAGTGCTGTAGAAAAAAGGCTCAAGAATAGCAAAGGACAAGCAACAGCCAAAAGTATGAATTTGGCTTCATGGTACCACGAGAGTGCTGCATCTGGTTCATCAACTAAGGAGTACAATAGGAAGTCAAGATCAGAAATGCAGACGGGAATGGACGATGCAAACACCCGTGTTGAAAAGTCTGAAAAAGGAAGAACCATATGCAATTCAACTGAGAACAAAGTTTATCGAGCAGCAGAAACAAGAAAAGTGGTGCTTCAGTTTATTGTATTCAATAATGATGATGCTGGTGATTGTCCTACAAATAAATTGTTAGATGAATTGGCAGTACTAAAGGAAAGGAACAAATATATGGGAACTCAGCTGAAAGAAATGGAAGAAAGATATTCTGAGATTAGTCTTAAGTTCGCAGAGGTAGAGGGTGAAAGACAACAGCTTGTTATGGACCTACGGAATCTGAGGAATGGTAAGAACTAG 2784 0.3836 MFKSRSKKNRIKAVFKLQFQATQVPRMKKSALKVALVPDDVGKPTVKLEKVAVQDGTCSWENPIFESVKFVRDTKSGKIQEKIYHFVVSTSNRYRFLQGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVTIQNVEGVQRDQSTYRNGEDNGNGSSRHLLSICSADEGSRNVSEDGNLTFKASNGVTPVGTLWQDFPKLLPPLRQNSMPSKGTIEAIATRAQIHRGSLGSASDRNLGDFWRNSLEDTLPRERLQEPSDNVIENLRSEIASLKRKAEESELELQSLQKLVEKECSQGQSMSRQIMNLREERNMIKTKYEQLMCQQNLNETKNSKVLQTEIEDARLQLEAIKEELAYEKEFSSNLQLQLHKRQNSNSELLLAVRELEAMMEHKNKELLDNNKEHDDATELGHLKQKIADLNGEIDIYYKQREQQTEHIEELNFECELLKKENLNISLRFKHEEAQQIVLQNKHSASLATIEQLESQVRRLEEKIEKQADDFSGSFIYINELENEVSGLKRELKTQAEEFIKDLQAMKCAKLEQEERAIQTEETLIETKHNNDLTCQRFQDEYRSLLVEMTLKVEEHEKKSMEAYQEANELQNQNKFMEEIVQKCNQEIRVITNQNELKLQQLLNQMDSKEKKVEMMSQELEINSKQLDDVQRHRDEKDKALTKQIQVLRIEIRKLMLEEYALSKADPTEHMLMQEKNDEEIRFDTLMSEVEIFKTQHDELKHNLHVEQAEKENMKEKISQLEEEVKKKEEELSAVEKRLKNSKGQATAKSMNLASWYHESAASGSSTKEYNRKSRSEMQTGMDDANTRVEKSEKGRTICNSTENKVYRAAETRKVVLQFIVFNNDDAGDCPTNKLLDELAVLKERNKYMGTQLKEMEERYSEISLKFAEVEGERQQLVMDLRNLRNGKN 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03185 927 Coils Coil 439 459 - -
Spst4g03185 927 MobiDBLite consensus disorder prediction 798 832 - -
Spst4g03185 927 Coils Coil 577 625 - -
Spst4g03185 927 ProSiteProfiles C2 NT-type domain profile. 3 146 IPR019448 -
Spst4g03185 927 Coils Coil 516 547 - -
Spst4g03185 927 Coils Coil 342 362 - -
Spst4g03185 927 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 868 926 - -
Spst4g03185 927 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 143 IPR019448 -
Spst4g03185 927 Coils Coil 549 569 - -
Spst4g03185 927 Coils Coil 481 508 - -
Spst4g03185 927 Coils Coil 384 411 - -
Spst4g03185 927 MobiDBLite consensus disorder prediction 808 832 - -
Spst4g03185 927 Coils Coil 271 305 - -
Spst4g03185 927 Coils Coil 877 911 - -
Spst4g03185 927 Coils Coil 735 783 - -
Spst4g03185 927 Coils Coil 313 333 - -
Spst4g03185 927 Coils Coil 630 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03185 Spst-Chr4 71447811 71452380 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03185 - - gmx:100800902 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03185 4 71447811 71452380 Spst10g00984 10 10543572 10547873 PCT