Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00984 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAATTGGAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGAATTCATTAATGGTATCTTTGGTGCCAGATGATGTCGGTAAGACAACAGTGAAACTAGAGAAAACTGCTGTTCAAGATGGGACCTGCTCGTGGGAGAATCCAATTTTTGAACCAGTAAAACTTGTTAGGGATGCAAAGTCAGGAAAAATTCATGAGAAAATCTACCATTTCATTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGTGAAGCCTCAATTGATTTAGCTGATTTTGTTGCAGAAATTGAGCCAATGACTATTTCTCTACCCTTAAAGTTTGCCAATTCAGGCATAGTTTTACACGTGACTATTCAGAACGTGGAAGGATATACTGCTGAAAGAAATGGGGAAGATAATGGAGCTGAGGAACTTTGCAGTGATAGAAGCTTGAAACACCAGCTGAGCTATGGCAGTACGGATCATGAAAGTTATAATGTTGATGAAAATGAGCACATGGCGAGGACCAGATCTGAGTATTCTGAACAAGATGCATCTAATGGCATCAGTCCTAGGGTAGCTTCATGGGAGGATCCTCATAGCTTCAGACAAAATTCAATTCCATCAAAAGGAACTGTTAAGGCCACTGCAACAGAAGTCCAAGTGCATAAGAGGTCAAACACAAACTGGTCAATCGGTTCAGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTGGAAGACAATCCTCCCAGAGAAAGATTACAAGAGCCTTCAAATAATTCCACTGAAGGCCTCAAGAATGAAATTGCTGCTTTGAAGAGGCAGGCAGAGGTGTCAGAAATAGAGTTACAATCACTTCGAAAGCAGGTAGAAAAAGAAAGCAGTAGGGGACAGAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTTGCTCAAAACCAAATATGAACAACTCAAGTCCCAGCAGAATTTCAATAGTGAGACCAAAGCCTCCAAAACCCTGAAGTCTGAGATTGAAGATACTAAGCTTCAGTTAGAGGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAATTGAGTGTCAATCTTCAGTTGCAACTGCGGAAGACACAAAACTCAAACTCTGAATTACTTTTGGCTGTGACAGACCTTGAAACAATGCTGGAACAAAAGGATAAGGAAATATTGGATCTATCTACCAATTTAAAATCTCAGACGACTACTAAAGAGCGTAATGAAGGCATAGAATTTGATCTCTTGCGGCTAAAAATTGCTGACCAGGATGATGAAATAAACAATTACTATAAGCAACGCGAAGAGCTAAGTGAGCAAATAAAAGAACTTACCTTGGAGTATGATCTACTTAAGAAGGAAAATGTGGATATCTCTCTGAGGTTAAAGCAAGACGAAGCACGCCACATCATGTTACAAAATGAACATTCATCTTCTTTAGTTACAATACAAAAACTTGAATCCCAAGTAGAGACATTAGAAGAAAAGCTAAAGGTGCAGGAAGATGAATTTTCAGCATCTCTGATCTGCATCAAGGAACTTGAAAATGAAGTTAAGTCTATGGAAAATGAATTGAAAATACAGGCAGAGAAATTTGAAGAAGGTCTGCATGCATTGCAGTGTGCAAAAACTGAGCAGGAAGAAAGGGCCATTCAGGCAGAAGAAACCTTGAGAAAGACTAGACACAATAATGCTGTTGCATCTGAGCATTTTCAGGAGGAATATAGATTGCTTTCTGTTGAAATGGCACAAAAAGTTGAGGAGAATGAAAAGATGGCTGTGAAAGCAGTTGCAGAAGCTGACGAGTTGCGGCACCAGAACAAACTTATAGAAGAAATGCTCCATAAATGCAATCAAGAGCTCAGGCTTATCACAGATCAGAATGAATTGAAAATGAAACAGCTTTTGGACCAAATAGACTTGAAAGCAAAAACAATAGAACAGATATCACAAGAACTACAAGTTAAGTGTAAACAACTTGAGGATGCACAAAGAAACAATGATGAAAAGGATGCTTCATTTTCCAAGCAAATTCAAATGCTCAGATCTCAAATCAAAATGTTGATGTCAGATGGTGCATTGTCTGAAAAAGAAAGGGAAGATGCATTTAGAGTTCAGAAAGGACAACCACTTATGACGTCAAACGACGGGGAGATGATACTTGGCACTCTACTGTCGGAAGTAGAAACCTTTAAGAACCAGCATATTGAAATAAAGCACAGTTTGCACAAAGAACAAGTGGAGAAAGAAAATATGAAGAAACAGATATCTCAATTAGAAGGAGAGCTGAAGAAGAAGGAAACAGAGTTAAGTACTATGGAAAAGAAGCTCAAGAATAACAAAGGACGAGCTGCAGTTACACATATGAATTTGACTTCAAGAGACAGTGAATGTGCGGCTAAGGCACATACCAAGAAGTCAAAATCCGAAATGCATAAGGGAAAGGATGCTGCAAGCAAGTCTGAAGCAGGAACAGTAGGCAAGTCAGCTGAGAGCAAAGTTTGTCAAGCTCCTGTAAGTGAGGATGAGGGCCATACAAATGAATTGTTGACTGAAGTTTCACTACTAAAGGAAAAGAACAAGACTATGGAGATTGAGCTGAAAGACATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCTGAGGTAGAGGGAGAAAGACAACAGCTTGTAATGGCTCTACGCAATCTCAAGAATGGGAAGAAGAACTAG 2766 0.3915 MFKSWSKKNKIKAVFKLEFQATQVPKMKKNSLMVSLVPDDVGKTTVKLEKTAVQDGTCSWENPIFEPVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDLADFVAEIEPMTISLPLKFANSGIVLHVTIQNVEGYTAERNGEDNGAEELCSDRSLKHQLSYGSTDHESYNVDENEHMARTRSEYSEQDASNGISPRVASWEDPHSFRQNSIPSKGTVKATATEVQVHKRSNTNWSIGSASDGSLGDWTNSLEDNPPRERLQEPSNNSTEGLKNEIAALKRQAEVSEIELQSLRKQVEKESSRGQNLSRQIISLREERDLLKTKYEQLKSQQNFNSETKASKTLKSEIEDTKLQLEAIKEELVYEKELSVNLQLQLRKTQNSNSELLLAVTDLETMLEQKDKEILDLSTNLKSQTTTKERNEGIEFDLLRLKIADQDDEINNYYKQREELSEQIKELTLEYDLLKKENVDISLRLKQDEARHIMLQNEHSSSLVTIQKLESQVETLEEKLKVQEDEFSASLICIKELENEVKSMENELKIQAEKFEEGLHALQCAKTEQEERAIQAEETLRKTRHNNAVASEHFQEEYRLLSVEMAQKVEENEKMAVKAVAEADELRHQNKLIEEMLHKCNQELRLITDQNELKMKQLLDQIDLKAKTIEQISQELQVKCKQLEDAQRNNDEKDASFSKQIQMLRSQIKMLMSDGALSEKEREDAFRVQKGQPLMTSNDGEMILGTLLSEVETFKNQHIEIKHSLHKEQVEKENMKKQISQLEGELKKKETELSTMEKKLKNNKGRAAVTHMNLTSRDSECAAKAHTKKSKSEMHKGKDAASKSEAGTVGKSAESKVCQAPVSEDEGHTNELLTEVSLLKEKNKTMEIELKDMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00984 921 MobiDBLite consensus disorder prediction 208 255 - -
Spst10g00984 921 Coils Coil 759 800 - -
Spst10g00984 921 MobiDBLite consensus disorder prediction 183 274 - -
Spst10g00984 921 Coils Coil 528 548 - -
Spst10g00984 921 MobiDBLite consensus disorder prediction 814 863 - -
Spst10g00984 921 Coils Coil 603 637 - -
Spst10g00984 921 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Spst10g00984 921 Coils Coil 437 478 - -
Spst10g00984 921 Coils Coil 493 520 - -
Spst10g00984 921 Coils Coil 553 580 - -
Spst10g00984 921 MobiDBLite consensus disorder prediction 815 836 - -
Spst10g00984 921 Coils Coil 870 904 - -
Spst10g00984 921 Coils Coil 649 683 - -
Spst10g00984 921 Coils Coil 345 365 - -
Spst10g00984 921 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Spst10g00984 921 Coils Coil 273 335 - -
Spst10g00984 921 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 856 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00984 Spst-Chr10 10543572 10547873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00984 - - vun:114190970 1578.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00984 10 10543572 10547873 Spst10g00984 10 10543572 10547873 ECH
Spst4g03185 4 71447811 71452380 Spst10g00984 10 10543572 10547873 PCT