Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03103 ATGCAGACCCTTAATGAGGCCTCCCACACATGCTCTCAATGCTGTTCCAGCTGCACAGACCCATTTTTCAACTCTTCAACATCATCACACAACACAACACCACCAAAATTCAGGAACAGTTCTGCTGAGTGGCGCCACAGCTTTGCAGTCACAACAAAATCATCTATATTCCCAAGCACTCAATTCACCAACCATGAGTCTCTTCCATCATTTCATGAATCATTCAATGAGTTCACCAAAGTGTACCCTCAGTATTCTGAGACTGAACAAGTTGACCATGTTAGAGCCAAGGACTATTTCCACCTGTCACTCTCCAACCAAACTTGCCTTGATTACATTGGCATTGGCCTCTTCTCTTACTCTCAGCTTCAACACCATGACACATCAAAAGATCAGGTACCCTCCTCTTCAATTCCTCAAATACCCCAGCCACAACCTAATTATTACTCAGGTATTCCATTCTTTACCATATCCAGTAAGACTGGTAGCTTAAAGACTTTGTTGCTTCATGGGGGACAAGACTCAGAATTTGAGGCTGCAATGAGAAAGAGAATCATGAATTTCCTTAACATATCAGAAAATGATTATTTTATGGTTTTCACAGCAAACAGAACCTCAGCCTTCAAACTTGTGGCAGATTCATACCAATTCCAAACCAGTAGGAGGCTTATGACAGTTTATGACTATGAGAGCGAGGCGGCCGAAGCAATTATTAGTTCCTCAGAGAAGAGAGGAGCAAGGGCCATGTCAGCAGAGTTCTCATGGCCAAGGCTGAGGATTCAGACCAAAAAGTTGAGGAAGATGATTGAGAGTAGGAGAAAGAAGAAGAAAAGAAAAGGACTTTTTGTTTTCCCACTTAATTCAAGAGTGACAGGAGCAAGGTACCCTTATCTGTGGATGAGCATAGCACAGGAGAATGGATGGCATGTATTGGTTGATGCATGTGCATTGGGGCCAAAAGACATGGACTGCTTTGGCCTCTCTCTCTTTCAACCAGACTTTCTTATTTGCTCTTTCTACAAGGTCTTTGGGGAAAACCCTTCTGGATTTGGATGCCTTTTCATCAAGAAATCTGCCATATCCAGCTTGGAATCTTCCCCTTCAGCAGGAATTGTCAACCTTGTACCAGAAAAGCAGCCTCATCCATCATGGGATGATTCTTATGGCATCGACTTAGAACCTAAATACAAACCAACACCAACATGCCCAAATGAAGAGAAACCATTTCCTCCGTCATCTTTCTCAGGTCCATTGCAAACTAAACAATCTGAAATAGTTGAAGAGGGAGAACCAACTGACTCAAAACTAAAAGCTCCTCACTGTTCTGAAATTGAGGAGATACAAGAGCCAGTTAAGACCCTCAAGAAAAGTAACGTCCAAGAAAGTGGCATCCAATGCAGGTGCTTAGACCAAGTGGATTCTTTGGGATTGGTTCTCATCACTAACCGGTCAAGGTACCTCATAAACTGGCTGGTAAGCTCTATGTTGAAGCTTATGCATCCTAACACACAAGAGGTTCCTCTGGTCAAGATTTACGGTCCAAAGGTGAAATTTGATAGAGGGCCTGCTTTGGCCTTCAATATATTTGATTGGAAAGGTGAAAGGGTTGAACCTGCGCTTGTCCAGAAACTGGCTGATAGAAGCAACATCTCTATCAGCTATGCGTTCCTGCATCATATTTGGTTTGCAGATAAGTATACAGTAGAGAAGGGAAAAGTCCTACAAACCAAAGTGGTTGGAGGCCAAGGAGTGGTGACAACAACTAACAAAAACAAAGATAGAGTTGGAATCACGGTGATTACTGCTGCATTAGGCTTCCTGGCTAATTTTGAAGATGTCTATAAGCTTTGGGCTTTTGTTGCTAGATTCCTTGATGCTGATTTTGTGGAGAAAGAGAGGTGGAGATATATTGCCATCAATCAGAAAACAGTTGAAGTTTAG 1941 0.425 MQTLNEASHTCSQCCSSCTDPFFNSSTSSHNTTPPKFRNSSAEWRHSFAVTTKSSIFPSTQFTNHESLPSFHESFNEFTKVYPQYSETEQVDHVRAKDYFHLSLSNQTCLDYIGIGLFSYSQLQHHDTSKDQVPSSSIPQIPQPQPNYYSGIPFFTISSKTGSLKTLLLHGGQDSEFEAAMRKRIMNFLNISENDYFMVFTANRTSAFKLVADSYQFQTSRRLMTVYDYESEAAEAIISSSEKRGARAMSAEFSWPRLRIQTKKLRKMIESRRKKKKRKGLFVFPLNSRVTGARYPYLWMSIAQENGWHVLVDACALGPKDMDCFGLSLFQPDFLICSFYKVFGENPSGFGCLFIKKSAISSLESSPSAGIVNLVPEKQPHPSWDDSYGIDLEPKYKPTPTCPNEEKPFPPSSFSGPLQTKQSEIVEEGEPTDSKLKAPHCSEIEEIQEPVKTLKKSNVQESGIQCRCLDQVDSLGLVLITNRSRYLINWLVSSMLKLMHPNTQEVPLVKIYGPKVKFDRGPALAFNIFDWKGERVEPALVQKLADRSNISISYAFLHHIWFADKYTVEKGKVLQTKVVGGQGVVTTTNKNKDRVGITVITAALGFLANFEDVYKLWAFVARFLDADFVEKERWRYIAINQKTVEV 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03103 646 Pfam Aminotransferase class-V 180 366 IPR000192 -
Spst4g03103 646 SUPERFAMILY PLP-dependent transferases 177 371 IPR015424 -
Spst4g03103 646 MobiDBLite consensus disorder prediction 396 436 - -
Spst4g03103 646 Gene3D - 169 375 IPR015421 GO:0003824
Spst4g03103 646 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 72 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03103 Spst-Chr4 70425298 70427238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03103 - - gmx:100790494 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03103 4 70425298 70427238 Spst10g01026 10 10966116 10968041 ECH
Spst4g03103 4 70425298 70427238 Spst4g03103 4 70425298 70427238 ECH
Spst4g03103 4 70425298 70427238 Spst10g01026 10 10966116 10968041 PCT