Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01026 ATGCGGTCCCTTGGTCAAAATGAAGCCTCCCTGGCATGCCCTCAAGGTTGTTGCCCAACTTCCTTATTGTTCGATCCTCCACCACCAGAATCTCAGAACACTACAAGCAAACCCAGGAACAGTTCTGCAGAGTGTCGCCACAGCTTTGCAGCCACAACAGCATCCTCCATCTTCCCAAACACCAAATTCACCGACCATGAGTCCCTTCCTTCTCTGCATGAATCATTCAGCGAATTCAACAAAGTGTACCCTCAATACTCCGAAACTAACCAAGTGGACCATGTGAGGGCTAAAGAATATTACCACCTCACTTTCTCCAGCCAATCATGCCTTGACTACATTGGTATCGGCCTCTTCTCCTATTACCAACGCCAACAATACCATGGCACCTCAAAAACCCAACTTGCCTCTTCTTCAGCACCCCAATCCTCACCCCAGTATTCGGATATTCCCTTCTTTAGCCTATCCTACAAGACTGGAAATCTGAAAACACTTTTGCTTCATGGGGGGCAGGAATCGGAGTATGAGTCTGCCATGAAGAGGAGAATAATGAAGTTCCTCAACATTTCTGAGAATGACTACTTCATGGTTTTCACAGCAAACAGAACTTCGGCTTTCAAACTTGTGGCAGACTCGTATCCATTCCAATCTAGCAAGAAGCTTCTGACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATTAATTGCTCAGAGAAGAGAGGAGCCAAGGCCATGTCAGCAGAGTTCTCATGGCCAAGGCTGAGGATTCAGTCAACAAAACTGAGGAAGATGATTGTTAGCAAGAGGAAGAAGAAGAAGAAAAGGGGTCTCTTTGTGTTCCCACTTCACTCCAGGGTAACAGGAGCAAGATATCCTTACGTGTGGATGAGCATAGCTCAGGAAAATGGTTGGCAGGTGTTGATCGATGCATGTGCATTGGGACCCAAAGACATGGATAGCTTTGGCCTCTCTCTCTTTCAACCAGACTTTCTCATCTGTTCATTCTACAAGGTCTTCGGAGAAAATCCGTCAGGGTTTGGATGTCTTTTTGTCAAGAAATCTGCTATCACCACTCTTGAATCCTCCTCTTGTGCAGGAATTGTGAACCTCGTGCCAGATAGGTTTCTAAATCAGCCATCAGCAGATAAGGGTTCTTCTGGGAACTGCAAACAAAAACCTTTAACTAGCTTGCAAGAACAAGAATTATCTTCCTTAAATTCTTTCTCTGGTCGGATACAAACTTCACAAGCTTTAAAAGTTGAAGAAGAATCTTCTGAGCTTCAGATCATAGTGCCAACAGAGTCAAAAGGACTGGTTGAGAGCCTTAAGACTACGAAAGCACGAGATGGTGAGAACGGGAGATTTAACATTGAGTGCAGATGTTTGGATCAAGTGGACTCTTTGGGATTGATACTGATCACCAATAGAACAAGGTACCTGATAAATTGGTTGGTGAACTCCATGATGAAACTGAAGCACCCTAATGCAGCAGGGGAATCCCTAGTCAAGATTTATGGCCCAAAGGTAAAATTTGATAGAGGACCTGCTTTGGCATTCAATGTGTTTGATTGGAAAGGTGAGAAGGTTGAGCCTGTCCTTGTACAGAAACTTGCTGATAGGAACAATGTATCTCTCAGCTATGGATTTCTGCATCATATTTGGTTTGCAGATAAGTATGCAGAAGACAAGGGAAAAGTTCTACAGACCAAAGAAGGAAGAGGCGAGGGAGTAACAACTAGCAAGAAGAAAGATAGGGATAGGCTAGGAGTGACAGTGGTTACTGCTGCATTAAGCTTCCTGGCTAATTTTGAAGATGTATATAAACTATGGACTTTTGTTGCCAGGTTCCTTGATGCTGATTTTGTGGAGAAGGAGAGATGGAGATACACAGCTCTCAATCAGAAAACAATTGAAGTTTAA 1926 0.4382 MRSLGQNEASLACPQGCCPTSLLFDPPPPESQNTTSKPRNSSAECRHSFAATTASSIFPNTKFTDHESLPSLHESFSEFNKVYPQYSETNQVDHVRAKEYYHLTFSSQSCLDYIGIGLFSYYQRQQYHGTSKTQLASSSAPQSSPQYSDIPFFSLSYKTGNLKTLLLHGGQESEYESAMKRRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSSKKLLTVYDYESEAVEAMINCSEKRGAKAMSAEFSWPRLRIQSTKLRKMIVSKRKKKKKRGLFVFPLHSRVTGARYPYVWMSIAQENGWQVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSAITTLESSSCAGIVNLVPDRFLNQPSADKGSSGNCKQKPLTSLQEQELSSLNSFSGRIQTSQALKVEEESSELQIIVPTESKGLVESLKTTKARDGENGRFNIECRCLDQVDSLGLILITNRTRYLINWLVNSMMKLKHPNAAGESLVKIYGPKVKFDRGPALAFNVFDWKGEKVEPVLVQKLADRNNVSLSYGFLHHIWFADKYAEDKGKVLQTKEGRGEGVTTSKKKDRDRLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTALNQKTIEV 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01026 641 Pfam Aminotransferase class-V 178 368 IPR000192 -
Spst10g01026 641 Gene3D - 163 393 IPR015421 GO:0003824
Spst10g01026 641 MobiDBLite consensus disorder prediction 27 44 - -
Spst10g01026 641 SUPERFAMILY PLP-dependent transferases 174 369 IPR015424 -
Spst10g01026 641 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 73 601 - -
Spst10g01026 641 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01026 Spst-Chr10 10966116 10968041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01026 - - gmx:100820534 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03103 4 70425298 70427238 Spst10g01026 10 10966116 10968041 ECH
Spst10g01026 10 10966116 10968041 Spst10g01026 10 10966116 10968041 ECH
Spst4g03103 4 70425298 70427238 Spst10g01026 10 10966116 10968041 PCT