Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03073 ATGATAAAGTTTGTTCTTCTTTTGCTATGCTTTGCCTCTGCACTGAGCCTTTCAGTTTCAGAGTCCAAATCTGTTTCTGTGCAACCTCGTGCAGCTGAATCCTTCTCTGCTGGGTATATTAAGATGAAAACGGCATCAAACTGTTCTTACTTGGTGCTTATAAGTACGAGTTGTTCATCGCCCAAGTTCACAACCGATAAGATTGGTATTGCGTTTGGAGATAATAAAGGAAACCAGGTATATGTACCAAGACTAGATGATCCACTTTCGAAGACATTTGAACAGTGTTCTTCAGACTCATTTCAGATAGATGGTGCATGTGCATCTCCCGTTTGCTTTCTGTATCTTCATAGAACTGGGGGAGAGAAAGGTTGGGAACCTGAGACTGTGAAAATCTTTGGCTACGACTCAGGGCCTGTCACTTTTACTTTCAAGACCCCCATTCCCAATGACACATGGTATGGCTACAATGAGTGTCAGGCTCCTCCTCCTCCTTCTCCTTCTTCCTCATTCCAACTATCCCCTCATAAATGGCTCATGAGTTTGGTTCTAGGCTTTGTTGTTAGCCTTTTGCTTTAA 579 0.4283 MIKFVLLLLCFASALSLSVSESKSVSVQPRAAESFSAGYIKMKTASNCSYLVLISTSCSSPKFTTDKIGIAFGDNKGNQVYVPRLDDPLSKTFEQCSSDSFQIDGACASPVCFLYLHRTGGEKGWEPETVKIFGYDSGPVTFTFKTPIPNDTWYGYNECQAPPPPSPSSSFQLSPHKWLMSLVLGFVVSLLL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03073 192 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 4 168 - -
Spst4g03073 192 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 45 156 IPR036392 GO:0005515
Spst4g03073 192 CDD PLAT 48 159 - -
Spst4g03073 192 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03073 Spst-Chr4 70090677 70092254 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03073 - - gmx:100305526 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03073 4 70090677 70092254 Spst4g03073 4 70090677 70092254 ECH
Spst4g03073 4 70090677 70092254 Spst10g01055 10 11284443 11286062 PCT