Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01055 ATGATAAAAAAGGTTATTTTTCTGCTCTTCTTGGCCTCTGGATTGACCCTCTCAGTTTCAGAGTCCCAATCTGTTTCTCTTCTGCCTCATGCTGCGGAGTCCTTCAATGTCAGCTATATCCAGCTGAAGAACGCGGGGAGTTGTTCTTACTTGGTGGTTATATCTACTAGTTGTTCGTCTCCTAAGTATACAAGGGACCAGATCAGTATTGCTTTTGGGGATGCTTATGGCAACCAGATATATGTTCCAAGACTGGATGATCCAGCTTCAGGTACATTTGAGAGCTGTTCTTCAGATACATTTCAGATAAATGGTCCATGTGCGTATCAGATATGTTATGTGTACCTATATAGACAAGGATCAGATGGTTGGAAGCCTGAAAGTGTGAAAATCAATAGTTATAATGGCAGGCCTGTTACTTTCTATTACAACACATATGTCCCCAGAGATACTTGGTATGGATTTGATTTGTGCAACGGTGCTTCTTCTTCTTCGTATCAGGTATCAAAGCAGAAATGGCTCATATTTATGATTCTAGGATTTGTTCTGAGTTTTTGGTTGTAA 564 0.4025 MIKKVIFLLFLASGLTLSVSESQSVSLLPHAAESFNVSYIQLKNAGSCSYLVVISTSCSSPKYTRDQISIAFGDAYGNQIYVPRLDDPASGTFESCSSDTFQINGPCAYQICYVYLYRQGSDGWKPESVKINSYNGRPVTFYYNTYVPRDTWYGFDLCNGASSSSYQVSKQKWLIFMILGFVLSFWL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01055 187 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 6 161 - -
Spst10g01055 187 Pfam Embryo-specific protein 3, (ATS3) 40 158 IPR010417 -
Spst10g01055 187 Gene3D PLAT/LH2 domain 45 154 - -
Spst10g01055 187 CDD PLAT 48 159 - -
Spst10g01055 187 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 46 155 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01055 Spst-Chr10 11284443 11286062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01055 - - gmx:100499692 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01055 10 11284443 11286062 Spst10g01055 10 11284443 11286062 ECH
Spst4g03073 4 70090677 70092254 Spst10g01055 10 11284443 11286062 PCT