Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03060 ATGGCCCTCGAAACCTGGCTCATCAAGGTCAAAACGGCGCTGTCGCACAGCCTCACGAAGAAACCGTCGTTTTCATCGTCGAAGCCAAAACACGTTGCCGTTTTGTCATTCGAGATCGCGAACGTGATGTCCAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACGCCAACGTCGTTCGCCTCCGAAACGACGCCGTCACGCTGGAAGGCGTGCGCAAGCTCATCTCCAACGACGAGTCTTTTCTTCTAAGCCTCGCCGTGGCCGAGTTCGCTGACTCGCTCCGACTCGTCGCCGACTCGGTCTCCCGACTGAGCAACAACTGCCACGACCCTTCTCTCCGATCCTTCCACCGAGTCTTCACCGAGTTCGCCAACTCGGGCCTCGACCCGCACGCATGGACCCTCACCACCCCCAAAGACATCGAAACCAAACACAGAAAGTTGCAACATTACGTGACTCTCACGGCAACGCTTCACAAAGAAATCGACGCTCTCACTCTCCTCGAAAGCGCGTTCAAAAAAGCGGTTCTCAACGCTGACAACGCCGCCACCGAACCCTCTTCCTCTCACAAAAAACTCAGCGATCTTCAGCAGAAGATTTTCTGGCAGAAACAAGAGGTGAAGAACTTGAAGGAACGTTCGTTATGGAACAAAAACTTCGATGGCGTTGTTCTGTTGTTAGCAAGGTTCGTTTTCACTGTGTTAGCGCGGATTAAGGTTGTCTTCGGAATCGGACACAGTAGTGTTCCCTTTTTGTCGCGTAGTTTGTCTTCCGTTTATCCCTCTGATCACCAAAACCCTATTTCCAATTCTTGTTCCTTTGTTTCTGGGCCATTGAAAAGCACAAAACTTGGTGAGGAAAATGAGGATTTGGGAAATGGGTTTTTTGAGTCTAATTGCAAGGTGTTGAAGTTGAAGGGTAATGGTGATAGTGATACTTTGGGTGCTTCAGCTTTGGCCTTGCACTATGCAAACTTGGTGATGGTGTTGGAGAAGATGGTAAAGTCACCCCAGTTGGTTGGGGTGGATGCTAGGGATGATTTGTATGGGATGTTGCCAAGTAGCATAAGGTCATCTTTGAGGGCAAGGTTGAGAGGGGTGGGATTTTCTGCATGTGATGATCATGTGCTGGCTGGAGAATGGAGAGATGCATTGGGGAGGATTCTGGGTTGGTTGGCACCTTTGGCACATAACATGATCAAGTGGCACAGTGAGAGGAGCTATGAGCAGCAAAACTTGGTACCAAAGACAAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAAACAAGGAGAAGACAGAAGCTGCCATCACTGAGCTGCTTGTGGGGTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACAGCTAAGGCATTGTTTGAATGTACCAAATTTAATAATGGCTTCTTAAGCTTGCCCAAGCCCAGCTAA 1431 0.4941 MALETWLIKVKTALSHSLTKKPSFSSSKPKHVAVLSFEIANVMSKLLHLWQSLSDANVVRLRNDAVTLEGVRKLISNDESFLLSLAVAEFADSLRLVADSVSRLSNNCHDPSLRSFHRVFTEFANSGLDPHAWTLTTPKDIETKHRKLQHYVTLTATLHKEIDALTLLESAFKKAVLNADNAATEPSSSHKKLSDLQQKIFWQKQEVKNLKERSLWNKNFDGVVLLLARFVFTVLARIKVVFGIGHSSVPFLSRSLSSVYPSDHQNPISNSCSFVSGPLKSTKLGEENEDLGNGFFESNCKVLKLKGNGDSDTLGASALALHYANLVMVLEKMVKSPQLVGVDARDDLYGMLPSSIRSSLRARLRGVGFSACDDHVLAGEWRDALGRILGWLAPLAHNMIKWHSERSYEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTKFNNGFLSLPKPS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03060 476 Coils Coil 193 213 - -
Spst4g03060 476 PANTHER BNAC09G50660D PROTEIN 18 463 - -
Spst4g03060 476 Pfam Domain of unknown function (DUF3475) 34 89 IPR021864 GO:0045927
Spst4g03060 476 Pfam Protein of unknown function (DUF668) 313 401 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03060 Spst-Chr4 69966976 69968406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03060 - - gmx:100801628 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03060 4 69966976 69968406 Spst4g03060 4 69966976 69968406 ECH
Spst4g03060 4 69966976 69968406 Spst10g00321 10 3200003 3203551 PCT