Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00321 ATGCAGGATGGGCTCATGGCTGCTCATTCATTTTCCGACAACGCAACATACAAATCCTTCATTGCCCTTCCATTGCAAATCACCCAGAGGAAACTCACCTTAAACTCAACCATGGCCCTTGAAACGCTCCTCGTCAAGGTCAAAACCGCCATATCAAACAAGTTCGACTCGGTTCCGCCCAAGCTTCTTAAAAAGAAACCCTCGTTCAAGTCCAAACCAAACGTCGGAGTTTTGGCGTTCGAGATTGCTGGCGTCATGTCGAAGCTCCTCCACCTCTGGCACTCGCTATCCGACGCCACCATCGTCCGCATCCGAAACGACGCTGTCAACCTCGAGGGTGTGAGGAAGATCATCTCCAACGACGAGTCCTTTCTCCTAGGACTCGCCTGCGCCGAGTTCGCCGAGTCACTCAGAGTCGTGGCGAACTCAGTGACCCGACTCAGCGCGCGCTGCGAGGACCCAAACCTGCGCCCCTTCCAGCAGGACTTCCTCGAGTTCGCAGACTCGGGCCGCGACCCAAACGGATGGGCCCTCCCTGGCCCAAAAGAAACCGAATCAAAGCTCAAGAAAATGGAGCGTTACGTGACGCTCACGGCAACCCTCTACCGCGAAATGGAGGAGCTCACGGTTCTGGAAAGCGGCTTCAGGAAAGCTATGAACCACGCTGAGGCCAACAACGTTGGGAGTAAAGACCAGCAAAAACTCTACGAAGTTCAGCAGAAGATTTTCTGGCAGAAGCAAGAGGTGAAGGATCTCAAAGAAAGATCACTATGGAGCAGGAGTTTCGACAACGTTGTCGTGCTCCTTGTAAGGTTCAGTTTCACTGTTTTAGCAAGGATTAAGGTTGTCTTTGGAATCGGTCACCGTATGCCTTGTCTGTCTCGTACTTTGTCTGCTTCGGCCACTGTTTATCCATCTGATCAAAGCCCTAATGATTTCGTTGTTTCTGGGTCATTGGAGCAAGACTCAAAGCCTGATGAAGAGGTCAGTGACGATATGGGAAGTGGGTTTTTTGAGTCTAACTCGAAGCTTCTGAGGCCACCCGAGAGCACGTTGGGGGCTGCTGGTTTGGCTTTGCACTATGCGAATTTGATCATAGTGATGGAGAAGATGATAAAGTCACCACACTTGGTTGGGTTGGATGCAAGGGATGATCTGTATGGCATGTTGCCGAGGAGCATAAGGTGGGGTTTGAGGGGGAGGTTAAGAGGGGTGGGGTTTTGTGCGAGTGATCCTGTTCTTGCTGGTGAGTGGAGGGACGCGTTAGGGAGGATATTGGGGTGGTTGTCACCTTTGGCACACAACATGATAAAGTGGCAGAGTGAGAGAAGCTTTGAGCAACACAACATGGTTCCCAAGACCAATGTGTTGCTGTTGCAGACTTTGTTCTTCGCCAACAAGGACAAGACTGAGGCTGCCATCACCGAACTTCTCGTGGGATTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGCGCCAATTCTAATGGGCTATTGCTCAAGTTGAGCAAACCAGTTAATGAGACATGA 1551 0.5068 MQDGLMAAHSFSDNATYKSFIALPLQITQRKLTLNSTMALETLLVKVKTAISNKFDSVPPKLLKKKPSFKSKPNVGVLAFEIAGVMSKLLHLWHSLSDATIVRIRNDAVNLEGVRKIISNDESFLLGLACAEFAESLRVVANSVTRLSARCEDPNLRPFQQDFLEFADSGRDPNGWALPGPKETESKLKKMERYVTLTATLYREMEELTVLESGFRKAMNHAEANNVGSKDQQKLYEVQQKIFWQKQEVKDLKERSLWSRSFDNVVVLLVRFSFTVLARIKVVFGIGHRMPCLSRTLSASATVYPSDQSPNDFVVSGSLEQDSKPDEEVSDDMGSGFFESNSKLLRPPESTLGAAGLALHYANLIIVMEKMIKSPHLVGLDARDDLYGMLPRSIRWGLRGRLRGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQHNMVPKTNVLLLQTLFFANKDKTEAAITELLVGLNYIWRFEREMTAKALFECANSNGLLLKLSKPVNET 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00321 516 PANTHER BNAC09G50660D PROTEIN 69 500 - -
Spst10g00321 516 Pfam Domain of unknown function (DUF3475) 77 132 IPR021864 GO:0045927
Spst10g00321 516 Pfam Protein of unknown function (DUF668) 351 438 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00321 Spst-Chr10 3200003 3203551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00321 - - gmx:100787581 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00321 10 3200003 3203551 Spst10g00321 10 3200003 3203551 ECH
Spst4g03060 4 69966976 69968406 Spst10g00321 10 3200003 3203551 PCT