Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03042 ATGAGTAACGTGATCGAGAAATTGGGCATTAAGATTGAAAAGAACCCTCCCGAAGACAAGCTCACTCAACTTGGTGTTAGGCAGTGGCCAAAATGGAGTTGCCCTCCGAGCAAATTCCCATGGACATATGAATCTAAGGAGACTTGCTATCTCTTGGAAGGAAAAGTGAAGGTTACCCCAAGTGGGGAAAATGAGTCAGTGGAAATTGCTGCTGGTGATTTTGTTGTGTTTCCGAAAGGGATGAGTTGCACTTGGGATGTGTCAGTTGCGGTTAACAAGCACTATAACTTTGAATGA 297 0.4411 MSNVIEKLGIKIEKNPPEDKLTQLGVRQWPKWSCPPSKFPWTYESKETCYLLEGKVKVTPSGENESVEIAAGDFVVFPKGMSCTWDVSVAVNKHYNFE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03042 98 SUPERFAMILY RmlC-like cupins 21 95 IPR011051 -
Spst4g03042 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Spst4g03042 98 PANTHER OS04G0445200 PROTEIN 2 98 - -
Spst4g03042 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Spst4g03042 98 CDD cupin_TM1112-like 29 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03042 Spst-Chr4 69796793 69798662 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03042 K06995 - gmx:100527331 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03042 4 69796793 69798662 Spst4g03042 4 69796793 69798662 ECH
Spst4g03042 4 69796793 69798662 Spst10g00303 10 3046351 3047181 PCT