Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00303 ATGGCATCATCATTTGTGGGTACTTCGTTTCCCAACCACTTCTCACAAACCAAACACTCATCTGTTCCTGTAAGCAGAGCAGTTCCAACAGGGAGGAGAGTGCACTTAACAACAAGAGCAGAGAGCATGACTACTGTCATTGAGAAACTTGGCATCAAGATTGAGAGGAACCCTCCTGAATCCAAGCTCACTCAACTGGGTGTTAGAAAATGGCCTAAATGGGGATGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCAAATGAATCAGTTGAAATTGCTGCTGGGGACTTGGTTGTGTTTCCCAAAGGAATGAGCTGCACTTGGGATGTGTCTGTTGGTGTGGACAAGCACTATAATTTTGAATAA 423 0.4468 MASSFVGTSFPNHFSQTKHSSVPVSRAVPTGRRVHLTTRAESMTTVIEKLGIKIERNPPESKLTQLGVRKWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCTWDVSVGVDKHYNFE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00303 140 CDD cupin_TM1112-like 71 139 - -
Spst10g00303 140 Gene3D Jelly Rolls 38 139 IPR014710 -
Spst10g00303 140 Pfam EutQ-like cupin domain 64 137 IPR008579 -
Spst10g00303 140 SUPERFAMILY RmlC-like cupins 60 137 IPR011051 -
Spst10g00303 140 PANTHER OS04G0445200 PROTEIN 9 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00303 Spst-Chr10 3046351 3047181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00303 K06995 - gmx:100499968 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03042 4 69796793 69798662 Spst10g00303 10 3046351 3047181 PCT