Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03034 ATGAGGCAGTTAGTACTAGTTCCTCTGCTCTTGCTTGTTCTTGCTGGTTTTCCATTCAAGGCAAAAGGGTATCTGCAACCATTTACAGATCGTCCTGGGACACTCTGGACTGACATATGGTCTGATCGTTTCCCTGATCCATTTCGTGCGTTAGAGCAAATCCCATTTGGGGTTGCCAAAGATCAGCCATTCATGGCTGTGTCACCTGCAAGAGTAGATTGGAAGGAGACACCAGCAGGACATATTATAATGATAGATGTGCCAGGGATGAAGAAAGATGAGATTAAGATAGAAGTGGAGGGAAACAGAGTGCTGAGAGTGAGTGGAGAAAGGAAGAAGGAGCAGGACAGGGAAGGGGATCACTGGCATAGAGTGGAGAGATCTTATGGCAAATTCTGGAGGCAGTTCAAGGTACCAGACAATGTGGATTTTGATTCTCTCAAGGCCAAGCTGGAGAATGGAGTGCTTACTCTCACAATGGCCAAGTTGTCACCAGATAAGATCAAAGCTCCAAGGGTGGTGAGCATTGCAGGGGATGATGAAGGCAAGCAGGATCTTTGA 561 0.467 MRQLVLVPLLLLVLAGFPFKAKGYLQPFTDRPGTLWTDIWSDRFPDPFRALEQIPFGVAKDQPFMAVSPARVDWKETPAGHIIMIDVPGMKKDEIKIEVEGNRVLRVSGERKKEQDREGDHWHRVERSYGKFWRQFKVPDNVDFDSLKAKLENGVLTLTMAKLSPDKIKAPRVVSIAGDDEGKQDL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03034 186 Gene3D - 29 177 IPR008978 -
Spst4g03034 186 Pfam Hsp20/alpha crystallin family 73 176 IPR002068 -
Spst4g03034 186 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 63 179 IPR002068 -
Spst4g03034 186 FunFam 22.0 kDa heat shock protein 33 176 - -
Spst4g03034 186 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 63 174 IPR031107 -
Spst4g03034 186 SUPERFAMILY HSP20-like chaperones 62 173 IPR008978 -
Spst4g03034 186 CDD ACD_ScHsp26_like 71 162 - -
Spst4g03034 186 ProSiteProfiles CS domain profile. 67 174 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03034 Spst-Chr4 69759600 69760160 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03034 K13993 - gmx:547971 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03034 4 69759600 69760160 Spst4g03034 4 69759600 69760160 ECH
Spst4g03034 4 69759600 69760160 Spst10g00300 10 3029885 3030460 PCT