Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00300 ATGAGGCTACAACAACTCAATTTGTTCCTTTTATTGCTCTTTGTTGCCAAAGCAAACGGGACTCTACTCCCATTCATAGATCCTCCCAGAGGCCTCTTGGCTGATCTCTGGTCTGATCGCTTCCCAGACCCGTTTCGTGTGCTGGAACAAATTCCATTTGGGGTTGACAAAGATGAGCAATCCGTGGCCTTGTCACATGCTAGAGTGGACTGGAAGGAGACCCCAGAAGGGCATGTGATAATGCTGGATGTGCCAGGGTTGAAGAGAGAAGAGATAAAGATAGAAGTGGAAGAGAGGGTGCTGAGAGTGAGTGGTGAAAGGAAGAGAGAGGAGGAGAAAAAGGGGGATCACTGGCACAGAGTGGAGAGGTCCTATGGCAAGTTCTGGAGGCAGTTCAGGTTGCCACAAAATGTGGACTTGGACAGTGTGAAGGCTAAGCTGGAGAACGGGGTGCTCACTTTGACTCTTGACAAGTTGTCACCTGATAAGATCAAAGGTCCAAGGGTGGTGAGCATTGCTGGGGAGGATCAGCAGCAAGCCAAGCTCAGCAAAGATGGGGCCAAGCAGGAGCTTTGA 576 0.5017 MRLQQLNLFLLLLFVAKANGTLLPFIDPPRGLLADLWSDRFPDPFRVLEQIPFGVDKDEQSVALSHARVDWKETPEGHVIMLDVPGLKREEIKIEVEERVLRVSGERKREEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPDKIKGPRVVSIAGEDQQQAKLSKDGAKQEL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00300 191 Gene3D - 30 174 IPR008978 -
Spst10g00300 191 Pfam Hsp20/alpha crystallin family 70 172 IPR002068 -
Spst10g00300 191 SUPERFAMILY HSP20-like chaperones 61 169 IPR008978 -
Spst10g00300 191 CDD ACD_ScHsp26_like 68 158 - -
Spst10g00300 191 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 57 169 IPR031107 -
Spst10g00300 191 FunFam 22.0 kDa heat shock protein 30 172 - -
Spst10g00300 191 ProSiteProfiles CS domain profile. 64 170 IPR007052 -
Spst10g00300 191 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 60 175 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00300 Spst-Chr10 3029885 3030460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00300 K13993 - gmx:100500319 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03034 4 69759600 69760160 Spst10g00300 10 3029885 3030460 PCT