Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02805 ATGTCGCTCCACGGCAGCGACCGCCGCGACACGTCGAGCTCGGGCGGAAATGGCACCGTGGCAGCGGCAAATCTGAGGCTGCGGCTGAACCCTAATAAGGAGCACAGACCCGATGGCTACGAGGACATGCAATTGGATTTCAGTCCTAACATCTTCAGTTCCTTGGAGAGGTACCTTCCTCCGAGCATGCTCAACGTGTCCCGTGACGATAAGGCCAAGTTCATGCGTGAGATTTTGCTCAAATATCTACCCGTCGGAGAACGCAGTAGATCTCAAAAGCATAGAGAATACAGACAAAAGATAATAGATAATTATCAGCCTCTGCATCGGGAATTGTACTATGTGAATCCTGCTACTTTCTTTGTCCCCTCATTTCGGAGAGCAATTAATGATAACACCGAGCAAAGCTTTAGAAGTATAATGTCTGAGCCCTCTCCAGGCATTTTTGTATTTGACATATTTCAAACTGATTTTTGTGAGTTATTGCTATCTGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAACAAAGTTTCGGATAATGCGTCCCAATACAATGAATAAATATGGTGCTGTACTTGATGACTTTGGACTTGAAAAAATGCTTGACAAGCTTATGGAAGGTTTTATTCGTCCTTTATCCAGAGTCTTATTTGCAGAAGTTGGTGGGGCAACCCTGGATTCTCATCATGGTTTTGTTGTAGAATATGGTAAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGACTCGGAAGTAACCTTAAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTTTTCCGGGGCATACGATGTGAGAAACATGTAAATACTGGAACTCATTCAGAGGAGATCTTTGATTATTCTCATGTTCCTGGACGAGCTGTGCTTCATCGGGGTCGTCATCGCCATGGTGCTAGAGCCACTACATCCGGTAATCGGGTCAACTTACTTTTGTGGTGCAGAAGTTCTGTCTTTAGGGAGATGAAACGGTATCAGAAAGATTTCTCCAGCTGGTGTGGTGAGTGCAGCCGTGAGAAAAAGGAAAGGCAACGCTCAACAATAGCTGCTACCAAATTGGAGTTGTTCAGGAGGGAGGGTGAATCCACTGCATAA 1125 0.4453 MSLHGSDRRDTSSSGGNGTVAAANLRLRLNPNKEHRPDGYEDMQLDFSPNIFSSLERYLPPSMLNVSRDDKAKFMREILLKYLPVGERSRSQKHREYRQKIIDNYQPLHRELYYVNPATFFVPSFRRAINDNTEQSFRSIMSEPSPGIFVFDIFQTDFCELLLSEIENFEKWVTETKFRIMRPNTMNKYGAVLDDFGLEKMLDKLMEGFIRPLSRVLFAEVGGATLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGIRCEKHVNTGTHSEEIFDYSHVPGRAVLHRGRHRHGARATTSGNRVNLLLWCRSSVFREMKRYQKDFSSWCGECSREKKERQRSTIAATKLELFRREGESTA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02805 374 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 15 363 - -
Spst4g02805 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 227 326 IPR005123 -
Spst4g02805 374 MobiDBLite consensus disorder prediction 1 42 - -
Spst4g02805 374 Gene3D q2cbj1_9rhob like domain 146 326 - -
Spst4g02805 374 MobiDBLite consensus disorder prediction 1 20 - -
Spst4g02805 374 SMART p4hc 146 325 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02805 Spst-Chr4 67776388 67782832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02805 - - gmx:100816390 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02805 4 67776388 67782832 Spst3g00706 3 10454584 10456248 ECH
Spst4g02805 4 67776388 67782832 Spst4g02805 4 67776388 67782832 ECH
Spst3g00706 3 10454584 10456248 Spst4g02805 4 67776388 67782832 PCT