Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00706 ATGTCTGAGCCTGCTCCAGGCATTTTTACCTTTGAGATTTTTCAACCACACTTCTGTGAGTTATTGTTATCTGAGGTTGAAAATTTTGAGAAATGGGTCAACACAACAAAGTTTCAAGTTATACGTCCCAGTATACTGAATAAATTCGGTGTTGTTCTTGATGACTTTGGCCTTCAAACCATGCTTGACAAGCTTATGAAAGGTTTTATCTGTCCTTTGTCCAAAGCTCTATTTGCTGAAATTGGTGGTTCAACTTTGGATTTTCATCATGGGTTTGTTGTTGAATATGGTACAGATAAAGATACTGACTTGGGTTTCCATGTTGATGATTCAGAAGTAACTTTGAATGTTTGTTTGGGGAAGCAATTTTCTGGAGGAGAACTTTATTTCCGAGGCATGAGATGTGATAAACACATAAATACAAAAAGTCATCCAAAGGAGAGTTTTGACTATTTCCATACCCCTGGAAGAGCTGTGCTTCATCATGGTCGACATCGCCATGGTGCTAGAGCTACAACATCAGGTCACAGGGTCAACCTGATTTTGTGGTGCAGAAGAGAGATGGTGAAGTTTAAAAAAGATTGTTCTAGCTGGTGTGCAGAGTGTTTTGAAGAGAAGAGAAAAAAGCTCTTACCATTGGATTGGGATGAGACCGAAGAGGTACCATCCAGGAAGGAAAAAGAACCAGCTGCACCACCTACAACTGGTGATAAGTGGAAGTGGGGGGTTAGAAAATAA 738 0.3997 MSEPAPGIFTFEIFQPHFCELLLSEVENFEKWVNTTKFQVIRPSILNKFGVVLDDFGLQTMLDKLMKGFICPLSKALFAEIGGSTLDFHHGFVVEYGTDKDTDLGFHVDDSEVTLNVCLGKQFSGGELYFRGMRCDKHINTKSHPKESFDYFHTPGRAVLHHGRHRHGARATTSGHRVNLILWCRREMVKFKKDCSSWCAECFEEKRKKLLPLDWDETEEVPSRKEKEPAAPPTTGDKWKWGVRK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00706 245 SUPERFAMILY Clavaminate synthase-like 13 194 - -
Spst3g00706 245 SMART p4hc 6 185 IPR006620 GO:0005506|GO:0016705|GO:0031418
Spst3g00706 245 Gene3D q2cbj1_9rhob like domain 8 185 - -
Spst3g00706 245 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 87 186 IPR005123 -
Spst3g00706 245 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 2 207 - -
Spst3g00706 245 MobiDBLite consensus disorder prediction 217 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00706 Spst-Chr3 10454584 10456248 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00706 - - ccaj:109804521 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02805 4 67776388 67782832 Spst3g00706 3 10454584 10456248 ECH
Spst3g00706 3 10454584 10456248 Spst3g00706 3 10454584 10456248 ECH
Spst3g00706 3 10454584 10456248 Spst4g02805 4 67776388 67782832 PCT