Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02745 ATGAGTTTGAAGAAAAGGGTCCTTTCAATTAACATTGAAGAGGCTGCTGTGGACTTTTTCAACCATCTCTTGCAGGAGAAGCCCAGGATTCCGGTCTTCATTCCTCTGATTCTGATTGCTTGGGCTGTTGAGAGATGGCTCTTCTCTGCCTCCTCTTGGGTTCCCCTTGCTCTTGCTGTGTGGACTACTATACAGTATGGGAGATACCAACGCAAACTACTTGTGGAGGACTTGGATAGGAAATGGAAGAGGATCATCCTGAATGTCTCGCCAATCACACCATTGGAGCATTGTGAGTGGCTGAATAAGTTATTGACAGAAGTTTGGTCCAACTATTTTAATCCCAAGTTTTCAATAAGGCTATCTGCTATTGTTGAGAAACGTTTAAAGCTCCGGAAACCAAGACTTCTGGAAAGAGTTGAGCTTCAGGAGTTTTCACTAGGATCATGCCCTCCTAGCTTGGCTTTGCGAGGGATGCGGTGGTCAGCTATTGGTGATCAGCGATTTCTGCAACTGGGTTTTGATTGGGATACAAATGAAATGAGCATTTTGTTGCTTGCGAAGCTTGCAAAGCCGTTGATTGGAACTGCTCGAATTGTGATTAACAGTCTTCATATAAAGGGTGATCTTCTTGCTACACCAATCCTAGATGGAAAAGCACTTCTGTACTCATTTGTGTCAACTCCTGAGGTGAGAATAGGCGTTGCCTTTGGAAGCGGTGGAAGCCAATCACTTCCTGCCACTGAATGGCCTGTTGTTTCTTCTTGGCTGGAAAAACTTTTTGCTGACACCTTGGTAAAAACCATGGTGGAACCTCGCCGTCGTTGTTTCACTTTGCCTGCAGTTGATTTAAGGAAAAAAGCAGTTGGAGGCATTATATATATCAGAGTGATTTCAGCGAATAAACTTTCTAGGAGTTGCTTTAAGACAAGTAGAAGGCAACCAAATGGGGCAACCAATGGTTGTTCAGAGGACAATTTTGATGACAAGGACCTTGAGACATTTGTAGAAGTAGAAGTTGAGGAATTAACCAGGAGAACAGATGTTAGAGTGGGTTCAACCCCAAGATGGGATGCCCCATTTAATATGGTTTTACATGATAATACAGGAACTCTTCGTTTCAATCTTTATGAGAGCCATCCCAACAATGTGAGGTGTGACTATCTAGCAAGTTGTGAAGTCAAGTTGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCCATAGGACCTGATTCTGGAGTCATAGCAAAGCAGGCACAGTTCTGTGGCGAAGAAATTGAAATGGTTGTCCCATTCGAGGGCCCCAACTCTGGAGAGTTGAAGGTGAGCATTGTAGTCAAAGAATGGCAATTTTCTGATGGTTCGCATAGTTTGAACAGTCTTCGGAGTAGCAGCTCTCAGCAGTCAATCAATGGATCACCAAATTTTCAGTTAAAAACTGGAAGGAAAATTAGTGTAACTCTTGTGGAAGGAAAGGATCTTGCTGCAAAAGACAAAGGTGGGAAATTTGACCCGTATATCAAATTGCAGTATGGAAAGGTTGTCCAGAAATCGAGGACTGTTCATACTCCAAATCCTGTCTGGAATCAGACATTTGAATTCGATGAGATTGGTGGTGGGGAATACTTAAAAATAAAAGGCTTTTCTGAAGAAACTTTTGGAGATGAAAACATTGGTAGTGCTCATGTGAATTTGGAAGGACTGGTTGATGGCTCAGTCAGGGATGTATGGATTCCTCTTGAAAGAGTGCGTTCTGGAGAATTAAGACTTCAAATATCGGTTAAAGTAGATGACCAAGAAGGATCGAAGGGTTCGGGTTTGGGCTCAGGCAATGGTTGGATTGAACTTGTTCTGATAGAGGGAAGGGATCTTGTTGCTGCAGATCTCAGAGGCACAAGTGATCCATATGTGAGGGTGCACTACGGAAGCTTTAAGAAAAGGACAAAGGTCATATACAAAACTCTAAATCCTCAGTGGAACCAGACCTTGGAGTTCCCTGATGATGGAAGTCCCCTAATGCTTTATGTCAAAGATCACAATGCATTACTACCCACATCAAGTATAGGTGAATGTGTGGTAGAATATCAAAGGTTGCCTCCTAACCAAATGGCTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGGGGTGAAATTCACGTCCAAATTACTAGAAAAGTTCCAGAGATGCAGAAGAGGCAAAGTCTAGAATCTGAACCTTCCTTGAGTAAACTACACCAAATTCCTAACCAGATAAAACAGATGATGATCAAGTTCAGGTCCTTTATAGAGGATGGAAATCTTGAAGGACTCTCCACTACACTGAGTGAGCTAGAAACACTAGAGGATACACAGGAAGGGTATATAGCTCAGCTGGAGACTGAACAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGCCAAGAGATCATTAATTCTTCTCCTTCCCTCAGCAGAAGATCTTCTTCAGCTGGAAACTGA 2481 0.4268 MSLKKRVLSINIEEAAVDFFNHLLQEKPRIPVFIPLILIAWAVERWLFSASSWVPLALAVWTTIQYGRYQRKLLVEDLDRKWKRIILNVSPITPLEHCEWLNKLLTEVWSNYFNPKFSIRLSAIVEKRLKLRKPRLLERVELQEFSLGSCPPSLALRGMRWSAIGDQRFLQLGFDWDTNEMSILLLAKLAKPLIGTARIVINSLHIKGDLLATPILDGKALLYSFVSTPEVRIGVAFGSGGSQSLPATEWPVVSSWLEKLFADTLVKTMVEPRRRCFTLPAVDLRKKAVGGIIYIRVISANKLSRSCFKTSRRQPNGATNGCSEDNFDDKDLETFVEVEVEELTRRTDVRVGSTPRWDAPFNMVLHDNTGTLRFNLYESHPNNVRCDYLASCEVKLRHVEDDSTIMWAIGPDSGVIAKQAQFCGEEIEMVVPFEGPNSGELKVSIVVKEWQFSDGSHSLNSLRSSSSQQSINGSPNFQLKTGRKISVTLVEGKDLAAKDKGGKFDPYIKLQYGKVVQKSRTVHTPNPVWNQTFEFDEIGGGEYLKIKGFSEETFGDENIGSAHVNLEGLVDGSVRDVWIPLERVRSGELRLQISVKVDDQEGSKGSGLGSGNGWIELVLIEGRDLVAADLRGTSDPYVRVHYGSFKKRTKVIYKTLNPQWNQTLEFPDDGSPLMLYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKRGEIHVQITRKVPEMQKRQSLESEPSLSKLHQIPNQIKQMMIKFRSFIEDGNLEGLSTTLSELETLEDTQEGYIAQLETEQMLLLSKIKELGQEIINSSPSLSRRSSSAGN 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02745 826 CDD C2 615 711 - -
Spst4g02745 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 610 724 IPR035892 -
Spst4g02745 826 SMART C2_3c 292 408 IPR000008 -
Spst4g02745 826 SMART C2_3c 484 578 IPR000008 -
Spst4g02745 826 SMART C2_3c 614 708 IPR000008 -
Spst4g02745 826 Gene3D C2 domain 290 433 IPR035892 -
Spst4g02745 826 PANTHER OS01G0128800 PROTEIN 9 822 - -
Spst4g02745 826 Coils Coil 789 809 - -
Spst4g02745 826 Gene3D C2 domain 469 597 IPR035892 -
Spst4g02745 826 Gene3D C2 domain 604 726 IPR035892 -
Spst4g02745 826 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 94 280 IPR031468 GO:0008289
Spst4g02745 826 Pfam C2 domain 615 711 IPR000008 -
Spst4g02745 826 Pfam C2 domain 484 581 IPR000008 -
Spst4g02745 826 Pfam C2 domain 292 402 IPR000008 -
Spst4g02745 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 325 405 IPR035892 -
Spst4g02745 826 ProSiteProfiles C2 domain profile. 585 709 IPR000008 -
Spst4g02745 826 CDD SMP_SF 117 277 - -
Spst4g02745 826 ProSiteProfiles C2 domain profile. 463 579 IPR000008 -
Spst4g02745 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 594 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02745 Spst-Chr4 67290588 67297821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02745 452 746 Lipid Metabolism Gene Families AT3G61300 24.269 2.27e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02745 - - gmx:100789237 1479.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02745 4 67290588 67297821 Spst3g00800 3 11490776 11497116 ECH
Spst4g02745 4 67290588 67297821 Spst4g02745 4 67290588 67297821 ECH
Spst3g00800 3 11490776 11497116 Spst4g02745 4 67290588 67297821 PCT