Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00800 ATGAGTAGTACTAGTAGTAAGAAAAGGTTCAATCTCATTCATCTTGAAGAGACTGCAGTGGACTTGTTGAACCATGTAGTGAAAGTGAAGGAGAAGAAGGGCTGGATTTCACTCCTCTTTCCACTCATTTTGATTGCTTGGGCTATTCACAGATGGTTATTCTCTTTCTCCAATTGGTTTCCCCTTGCCCTTGCTCTATGGGCATCTATGCAATATGGGAAGTATCAGCGCAAACTACTTGAGGAAGACTTGAATAAAAAATGGAATCGGATCCTACTCAACACTTCGCCAGTGACACCATTGGAACACTGCGACTGGTTGAATCTGCTATTGACACAAATTTGGTCCAACTATTTCAACCCCAAGTTCTCAAGAAGGTTATCGGCCATAGTTGAGAAACGTTTAAAGCTCCGAAAACCAAGATTTATAGAAAAAGTTGAGGTGCTAGAGTTTTCACTTGGATCATGCCCCCCAAGTTTGGGTCTTCAAGGGATGCGATGGTCAACCTCTGGTGATCAGAGAGTCCTGAAAATGAGTTTTGAGTGGGACACAAGCGAAATGAGCATTTTGATGCTTGCTAAGCTTTCCGTTGGAACAGCCAGAATTGTGATTAACAATCTTCATATCAAGGGTGAGCTTCTGGTGACTCCAATTCTAGATGGAAATGCACTTCTGTATTCATTTTCATCCACACCTGAGGTGAGAATAGGAATTGCCTTTGGAAGCGGAGCAAGCCAATCAGCCACTGAGTTGCCTGGGGTTTCTCCATGGCTGGATAAACTTTTTACTGATACGTTGGTTAAAACCTTGGTGGAACCTAGACGCCGTTGTTTCAGTTTGCCTGTGGTTAATTTGAGGAAAACTGCTGTTGGAGGCATTATATATGTGTCAGTGATTTCAGCACACAAACTTTCTTGGAGTTGCTTCAAGAGTAGCCGATCTTTGAGGCAACAGAATAGCACAGTCAATGGACGTTCAGAAAGCAACCTGGATGACAAGGACCTGCAGACATTTGTTGAGGTAGAAGTGGAGGAATTGACAAGGAGGACGGGTCTGAGCCGTGGTTCAAATCCAACGTGGGATACAACATTTAATATGGTTTTACATGATAATACAGGAATTGTTCGCTTCAATCTTTATGATCATCCCTCTAGCGGTGTAAAGTGTGACCACCTAGCAAGTTGTGAAATCAAGATGAGGTATATTGAAGATGATTCAACAATAATGTGGGCAATAGGACCTGATTCTAGTGCAATAGCAAGGCATACAAAGATTTGTGGAGATGAAGTTGAAATGGTTGTCCCATTTGAGGGGACCAACTTAGCGGAGTTAAAGGTGAAGATTGTAGTAAAAGAGTGGCAGTTTTCTGATGGTTCACATAGTTTGAACAACCTCCCTACTAATTCTCAGCAATCACTTATTGGATCATCTACTCTTCAGTCAAAAACTGGAAGGAAACTTAAGATAACAATTTTAGAAGCAAAGGATCTCGCTACAAAAGACAAATCTGGAAAAGTCAACCCATACATTAAATTGCAATATGGAAAGGTTCGTAAGAGAACAAAGGTTGCTCCTTCTACTACTACTACTACTTCAAATCCTGTATGGAATGAATCATTTGATTTTGATGAGAACGATGGTGATGAATACCTAAATGTAAAATGCTTTAGTGAAGAAATTTTTGGAGATGAAAATATTGGTAGTGCAAATGTAAATTTGGAAGGACTGGGGGACGGATCAATGAAGGATGAATGGATCCCTCTTGAAGGAGTGAGTTCTGGTGAATTAAGACTTAAAATCGAAGTAGTTAGGGTGGAGGACCAAGAAGGATCAAGGGGTTCAGCTAATGGTTGGATAGAACTTGTTGTGATTGAAGCAAGAGATCTTATTGCTGCAGATCTTCGTGGGACAAGTGATCCTTATGTGAGGGTGAACTACGGAAACTTGAAGCGAAGGACAAAGGTTATACACAAAACTCTCAACCCTCGTTGGAACCAAACCTTAGAGTTCCTTGACGATGGTAGTCCCCTGACACTGCATGTTAGGGACCACAATGCCTTACTACCCACATCAAGTATAGGGGAATGTGTTGTAGAATATCAAGGGTTGCCTCCAAACCAGATGTCTGACAAATGGATACCTCTCCAAGGGGTGAAAAGTGGCGAGATACACATCCAAATAACAAGAAAAGTTCCGGACATGCAAACAAGAAGTTCTCTAGATTCTCAACAATCTTCGTCAAGTAAATCACGCCAAATTCCTACCCAGATGAGGGAGATGTTGAAAAAGTTTCGATCATTAATAGAGGATGGAAATCTTGAAGGACTGACTACAACTTTAAGTGAAATAGAAAGTCTAGAGGATACACAGGAAGGGTACATAGCACGGTTGGAGACCGAGCAAATGCTTCTTCTCAGCAAAATAAATGAACTGGGTCAGGAGATCCTCAATTCTTCGTCTCTCACTTCTAGTGCTTCTCAAAGTGGAACTAGGTGA 2496 0.4143 MSSTSSKKRFNLIHLEETAVDLLNHVVKVKEKKGWISLLFPLILIAWAIHRWLFSFSNWFPLALALWASMQYGKYQRKLLEEDLNKKWNRILLNTSPVTPLEHCDWLNLLLTQIWSNYFNPKFSRRLSAIVEKRLKLRKPRFIEKVEVLEFSLGSCPPSLGLQGMRWSTSGDQRVLKMSFEWDTSEMSILMLAKLSVGTARIVINNLHIKGELLVTPILDGNALLYSFSSTPEVRIGIAFGSGASQSATELPGVSPWLDKLFTDTLVKTLVEPRRRCFSLPVVNLRKTAVGGIIYVSVISAHKLSWSCFKSSRSLRQQNSTVNGRSESNLDDKDLQTFVEVEVEELTRRTGLSRGSNPTWDTTFNMVLHDNTGIVRFNLYDHPSSGVKCDHLASCEIKMRYIEDDSTIMWAIGPDSSAIARHTKICGDEVEMVVPFEGTNLAELKVKIVVKEWQFSDGSHSLNNLPTNSQQSLIGSSTLQSKTGRKLKITILEAKDLATKDKSGKVNPYIKLQYGKVRKRTKVAPSTTTTTSNPVWNESFDFDENDGDEYLNVKCFSEEIFGDENIGSANVNLEGLGDGSMKDEWIPLEGVSSGELRLKIEVVRVEDQEGSRGSANGWIELVVIEARDLIAADLRGTSDPYVRVNYGNLKRRTKVIHKTLNPRWNQTLEFLDDGSPLTLHVRDHNALLPTSSIGECVVEYQGLPPNQMSDKWIPLQGVKSGEIHIQITRKVPDMQTRSSLDSQQSSSSKSRQIPTQMREMLKKFRSLIEDGNLEGLTTTLSEIESLEDTQEGYIARLETEQMLLLSKINELGQEILNSSSLTSSASQSGTR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00800 831 CDD C2 619 715 - -
Spst3g00800 831 CDD C2 328 406 - -
Spst3g00800 831 CDD SMP_SF 123 278 - -
Spst3g00800 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 614 728 IPR035892 -
Spst3g00800 831 CDD C2 487 588 - -
Spst3g00800 831 MobiDBLite consensus disorder prediction 732 755 - -
Spst3g00800 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 286 407 IPR035892 -
Spst3g00800 831 SMART C2_3c 293 411 IPR000008 -
Spst3g00800 831 SMART C2_3c 618 712 IPR000008 -
Spst3g00800 831 SMART C2_3c 486 585 IPR000008 -
Spst3g00800 831 Pfam C2 domain 294 405 IPR000008 -
Spst3g00800 831 Pfam C2 domain 486 588 IPR000008 -
Spst3g00800 831 Pfam C2 domain 619 715 IPR000008 -
Spst3g00800 831 ProSiteProfiles C2 domain profile. 592 713 IPR000008 -
Spst3g00800 831 Gene3D C2 domain 284 413 IPR035892 -
Spst3g00800 831 PANTHER OS01G0128800 PROTEIN 12 827 - -
Spst3g00800 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 485 606 IPR035892 -
Spst3g00800 831 ProSiteProfiles C2 domain profile. 468 586 IPR000008 -
Spst3g00800 831 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 100 281 IPR031468 GO:0008289
Spst3g00800 831 Gene3D C2 domain 605 730 IPR035892 -
Spst3g00800 831 Gene3D C2 domain 467 604 IPR035892 -
Spst3g00800 831 Coils Coil 794 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00800 Spst-Chr3 11490776 11497116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00800 618 704 Lipid Metabolism Gene Families AT1G51570 34.444 2.77e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00800 - - gmx:100805496 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02745 4 67290588 67297821 Spst3g00800 3 11490776 11497116 ECH
Spst3g00800 3 11490776 11497116 Spst3g00800 3 11490776 11497116 ECH
Spst3g00800 3 11490776 11497116 Spst4g02745 4 67290588 67297821 PCT