Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02742 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGCCTCTAGCTCCTTCCACCTTCTCTTCCTCCTCCTCTTCTCCTCTTCCTTTTTGCTTATCAAGCTCTTAAACTTCATTGCCAGCTTCACCATCTTCCGAAGAGATCACCACTATGAATATGTGTCTTCTGAGTATGATGAAGAAGAAGAAGGAGAAGAAGAAATTCAAGAAAACTACTCTTATATGCATGATTCTAGTGAGACAGATCACCTTGTAGCTGACATCATTGGTGGTGGAGAATCCCTTTTGTTTGTGCACAACAACCAGCCTCACAGGACTCATTCTTCTTCCGATGAATTCATAAGCCCCCGGGATAGCCTTGTTGAAGAAGAGTCAGAAGAAAAGTATTCAACAGAAACCTTGTCTTTTCACAAGTCATCTTTAGTTTCAGACTTCGAAAATGAAGAAGAGGAAGAAGAATTTCCAGCTGAAGATGCTGATTCTGTTCCAAATTCTGTCCCGGATGAAAGCAGGCCCACATCTCCCATCACCCTGAACCTCTACAAAAGTGACTCACCAGACAGTGACAAAATCTATGACGAAGATCGTGTTGAAATTGGACTTGTTGAAAATAAGAAGGTGCTAGAGGCAAGCCTCACACGGGATGAGAGATTCTTGGTGTATGCTCCCACCCAATTGGAAGCCAAGAAGCTCATTGTTGAGGAAAAGGATGATGAAGAAATATACGGTGACTCATGCACTGTTGGGTCCACTTCTAAGAGCTCCTCTGATTGGAGGAGCTCCATTAACTGCAGAGATTCTGGAACTGATGATCCTTTTTCTTCCTCATCAAGAAGAAGTTGCCCCAAGTGGGAATCCTACACAGTTTTCCAAAAATATGATGAAGAAATGTCATTTCTAGATAGAATTAGTGCACAGAAACTTCAAGAAACTGAATCTTTAAGGTCTATCAAGGTATCTCCGAGGTCAATTTCAGAGCGTATTGTATTCAAGTTTTCAAGTATGAATAAAAAACCAGGTGATACACGCCACAACCCATATCATGAACTTGAGGCTGCATATGTTGCACAAATTTGCATAACATGGGAAGCCCTTAATTGGAACTACAAGAATTTTCAATCCAAACGTGCTTCACGAGGCCATGAAGTTGATGTGGGTTGTCCAGCCACCATTGCACAGAGATTCCAACAATTTCAAGTGTTGTTGCAGAGATACGTTGAGAACGAGCCCTATGAGCATGGTAGAAGACCAGAGATCTATGCTAGAGTGAGGCATTTGGCTCCAAAATTGCTACTAGTACCAGAATATCGAGAATCAGAAAATGATCAGAGGGATGAGAATGGTTTTCAGTCAAAAATATCATCAGCTTCATTTCTTATGATAATGGAAGATGGGATCAGAACGTTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCATGTCAGATTCTTGCAGCTTACTTTAGGAGAAACCGAAGACCCTTGGTTGATCCAACACTTCTACGCCTCATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAGGACCTTCGGCGTTCAAGCAAATGCTTGAGGAAGAGGAAGCTGAAGGGAGAAGAAGAGATGGAGATTCTGATGGGACTGATAGACCTGAAAGTGGTGTCAAGGGTTTTGAGAATGAGCGAGTTGAGTGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGCAAAGTGAGAGTGGTGGAAGGAAAACTACAAAGAGATTCCACGCCACTTTTTTTCCCTGCACATTGA 1782 0.4181 MPCSKEEALVRLFYNASSSFHLLFLLLFSSSFLLIKLLNFIASFTIFRRDHHYEYVSSEYDEEEEGEEEIQENYSYMHDSSETDHLVADIIGGGESLLFVHNNQPHRTHSSSDEFISPRDSLVEEESEEKYSTETLSFHKSSLVSDFENEEEEEEFPAEDADSVPNSVPDESRPTSPITLNLYKSDSPDSDKIYDEDRVEIGLVENKKVLEASLTRDERFLVYAPTQLEAKKLIVEEKDDEEIYGDSCTVGSTSKSSSDWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLQETESLRSIKVSPRSISERIVFKFSSMNKKPGDTRHNPYHELEAAYVAQICITWEALNWNYKNFQSKRASRGHEVDVGCPATIAQRFQQFQVLLQRYVENEPYEHGRRPEIYARVRHLAPKLLLVPEYRESENDQRDENGFQSKISSASFLMIMEDGIRTFMSFLKADKEKPCQILAAYFRRNRRPLVDPTLLRLIKKVNQKKKMKVKDLRRSSKCLRKRKLKGEEEMEILMGLIDLKVVSRVLRMSELSEEQLHWCEEKMSKVRVVEGKLQRDSTPLFFPAH 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02742 593 PANTHER DNA LIGASE (DUF1666)-RELATED 12 593 - -
Spst4g02742 593 MobiDBLite consensus disorder prediction 112 135 - -
Spst4g02742 593 MobiDBLite consensus disorder prediction 108 184 - -
Spst4g02742 593 MobiDBLite consensus disorder prediction 168 184 - -
Spst4g02742 593 Pfam Protein of unknown function (DUF1666) 351 591 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02742 Spst-Chr4 67264329 67267951 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02742 - - gmx:100786564 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02742 4 67264329 67267951 Spst4g02742 4 67264329 67267951 ECH
Spst3g00804 3 11510723 11518625 Spst4g02742 4 67264329 67267951 PCT