Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00804 ATGATAAAAATTTATAAGCTCTTTTACATCACCAAGAAGAGACTTCAGCGTAATTTTGCTACGCATCTTGTTGTAAGAAAGAAGACACGATTGTCCAATATTCTAAACTCTGTGAACTTCACGACAGGTTTGTCCTTTGTGCTTAGGGCTTATAACCAGGGACATGATATTAGAGATTTTGACATTTCAGATGTTGTTGTTGTTGATGTTGACCAAGAAGGATACACATTACGAAAGCAACTGAAGGAGTTGCTTTGCTTAGTGGTGGAGTCCTCTGAAGCTCACTTTGGAGCCACCACAAAGAAAATGCTGCTATGTCCCAAAGAAGATGCACTTCTTAAACTATTCTACAATGTCTCAAGCCCTTTCCACCTTCTCTTCCTCGTTCTCTTCTCCTCTGCCATTTTCCTTCTCACCTTCTTAACCTTCACAGGCAGATATCCCTTTATCCAAAGGGATCAAGAATATGAATATGTGTATACCGAGGATGAAGAAGAAGAAGAAGAAGAAGAAACTCAAGAAGGGTATTCTTGTGTTGATTCTACTGAGGGAAAAAACATTACTTGTGGGAAGGAAATTCTCGTGTTTGGGCACAATGAGAGGCATCAAAGGTCTCATTCTTATTTGGAAGAATTCATAAGCCCCAGGGAGAGCTTGAATGAAGAGTCAGAAGAAAAACATTATTCTGATGAAACCTTGTCTCTCCATAACTCACCACAAGTTTCTGACTTCGAAAATGTAGAGGCAGAAACGGTTGAAGAAGACTTTCCAGCAAGAGATTCTGATTCTGTTCCAAATTCTGCCAAAGTTGAAAGCAGGACCGCCTCTCCCCTCAATCTCAACTCTTACAAAAGAAATAAAACCCATGATGACAATCATGTTAGCGTTGAAATTATTAAAAACAAGAAGGTGCAAGAGCCAAACCTTGCAAGAGATGAGAAATTTTTCGTTTTTGCTTCTACCCAGTTGCAGAGTAAGAAGTTGATGGTGGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCTGTCAATTGCAGGGATTCCGAGACTGAAGATGCATTTTCTTCTTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAAATGGCAATCTTGGACAGAATTAGTGCACAAAAACTTCATGAAACCGAGTCATTAAGGTCCATCCAAATGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAAACTATAAATAAAAAACCCGCTGATGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATATGTAGCACAAATTTGCTTAACATGGGAGGCCCTTAGCTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGACCATGATACCGGTTGTTCTGCTACGGTTGCTCAGCAATTCCAGCAGTTTCAGGTTTTGTTACAAAGGTACATTGAGAATGAGACTTATGAGCATGGTAGGAGACCTGAAATCTATGCTAGAATGAGGCTTTTGGCACCAAAATTGCTCCTGGTGCCAGAATATCAAGATTTAGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTAAAGATAATGGAGGATGGGATAAAAACATTCATGAATTTTCTGAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTTAGGAGAAACCAAAGAGGAACAGTTGATCCAACACTACTCAGACTGATGAAGAAGGTTAATCAAAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTGAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTCATAGACCTAAAAGTGGTGTCAAGGGTTTTAAGAATGAGTGACATGAGTGAAGAGCAGTTGCACTGGTGTGAGGAGAAGATGAGCAGAGTGAGAATCATGGAAGGAAAACTTCAGAGAGATTATTCCACCCCACTTTTCTTTCCCTCACATTGA 2019 0.4017 MIKIYKLFYITKKRLQRNFATHLVVRKKTRLSNILNSVNFTTGLSFVLRAYNQGHDIRDFDISDVVVVDVDQEGYTLRKQLKELLCLVVESSEAHFGATTKKMLLCPKEDALLKLFYNVSSPFHLLFLVLFSSAIFLLTFLTFTGRYPFIQRDQEYEYVYTEDEEEEEEEETQEGYSCVDSTEGKNITCGKEILVFGHNERHQRSHSYLEEFISPRESLNEESEEKHYSDETLSLHNSPQVSDFENVEAETVEEDFPARDSDSVPNSAKVESRTASPLNLNSYKRNKTHDDNHVSVEIIKNKKVQEPNLARDEKFFVFASTQLQSKKLMVEEKDDESSKWKSSVNCRDSETEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTINKKPADVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDHDTGCSATVAQQFQQFQVLLQRYIENETYEHGRRPEIYARMRLLAPKLLLVPEYQDLEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLRLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALIDLKVVSRVLRMSDMSEEQLHWCEEKMSRVRIMEGKLQRDYSTPLFFPSH 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00804 672 MobiDBLite consensus disorder prediction 219 274 - -
Spst3g00804 672 Pfam Protein of unknown function (DUF1666) 431 670 IPR012870 -
Spst3g00804 672 PANTHER DNA LIGASE (DUF1666)-RELATED 115 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00804 Spst-Chr3 11510723 11518625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00804 - - gmx:100776190 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00804 3 11510723 11518625 Spst3g00804 3 11510723 11518625 ECH
Spst3g00804 3 11510723 11518625 Spst4g02742 4 67264329 67267951 PCT