Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02428 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGGTCTTTCTTCGAAGAGCTTCCACCTTCTCCGCCACTCTCCAAGAGGCTACGTTGTTCCTCTTCGCCGATTCGCTTTCCTGCCCCCTCACTCATCGACCAACTTCGCCCGCTCTTTCCCCACATGGACGACTTGGTCCTTGAGAGAGTTCTTCAGGAGTGTGGGAATGATATAGATGCTGCCATCAAGAGGCTGAACGAGCTTTGCTTGGGAAATGCAGATGGAAATAGAAATGCTGAAGAATCGGAGATTGTTGTTACTTTGGATGCAGGTAAATTGGAGGATACTGGAAATGCTTCTGTTCCTGAGGACCAGCCTACTTTGAACAACCACCTCCCTGCTGATGGAGCAGAATGGATTGACTTTTTTGTTAGGGAAATGATGGTTGCTACCAGTGTTGACGATGCTAGAGCCCGTGCTGCTAGAATGCTAGAAGTTCTAGAGAAATCAATTAGTGAAAGAGCAAGGGCTGAGACAACTGATGCACTTCAGAAGGAAAATTTGATGCTGAAAGAGCAAATTGAAGCATTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATTTGCTGATTACGAGGTTAAGAACCAAGAGTTGCAGCATTTGAAGCAATTGGTATCTCAATACCAGGAGCAGATTAGAACTCTCGAGGTGAATAACTATGCTTTGGCAATTCATTTGAAGCAGGCTCAACAGAGCAACTCCTTTACTGGGCGCTTCCCACCTGATGTCTTCTAA 783 0.4521 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPAPSLIDQLRPLFPHMDDLVLERVLQECGNDIDAAIKRLNELCLGNADGNRNAEESEIVVTLDAGKLEDTGNASVPEDQPTLNNHLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAETTDALQKENLMLKEQIEALIKEKNSFKNAFRIQHERFADYEVKNQELQHLKQLVSQYQEQIRTLEVNNYALAIHLKQAQQSNSFTGRFPPDVF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02428 260 Coils Coil 169 196 - -
Spst4g02428 260 CDD CUE 39 74 - -
Spst4g02428 260 Coils Coil 207 234 - -
Spst4g02428 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Spst4g02428 260 Pfam CUE domain 39 76 IPR003892 GO:0043130
Spst4g02428 260 SUPERFAMILY UBA-like 39 82 IPR009060 GO:0005515
Spst4g02428 260 Gene3D - 37 79 - -
Spst4g02428 260 ProSiteProfiles CUE domain profile. 36 79 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02428 Spst-Chr4 64695527 64698912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02428 - - gmx:100813137 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02428 4 64695527 64698912 Spst4g02428 4 64695527 64698912 ECH
Spst5g00079 5 886055 887982 Spst4g02428 4 64695527 64698912 PCT