Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02408 ATGGAAGCAATCACGGAGGGAGTGAACAACGTCAACATCTCTGAAGCTTATAAGAAGAATCGCATTCAGGTCTCCAATACCAAAAAGCCCCTATTCTTTTACGTTAATCTCGCCAAGAGGTACATGCAACAGCATAATGAGGTCGAGCTCTCAGCACTGGGAATGGCTATTGCTACAGTGGTTACTGTTGCTGAAATCTTGAAAAACAATGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGATATAAAAGATGATTCTAGAGGAAGACCAGTCCAGAAGGCCAAGATTGAAATATTGTTGGGGAAGACTGCAAACTTCGATGAGTTGATGGCTGTTGCGGCTGCAGAAGATGGTGAAAATGGAGATGCTGAAGAGCACACTGCATGA 396 0.4293 MEAITEGVNNVNISEAYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAVAAAEDGENGDAEEHTA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02408 131 Gene3D - 18 129 IPR036882 GO:0003676
Spst4g02408 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 122 IPR014560 -
Spst4g02408 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Spst4g02408 131 Pfam Alba 20 75 IPR002775 GO:0003676
Spst4g02408 131 SUPERFAMILY AlbA-like 19 113 IPR036882 GO:0003676
Spst4g02408 131 FunFam Uncharacterized protein At2g34160 18 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02408 Spst-Chr4 64536042 64538104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02408 - - gmx:100305539 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02408 4 64536042 64538104 Spst4g02408 4 64536042 64538104 ECH
Spst5g00107 5 1030776 1033052 Spst4g02408 4 64536042 64538104 PCT