Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02376 ATGATGGAGTTGATTTCGGGTCTACCAGAGGACGTAGCACGGGGCTGTCTGATTCGAGTGTCGTACCAGCAGTTCTCCACGGTGGCGTCGGTGTGCAGGCTCTGGAAATCGGAGATTCACGCGCCGGAGTTCCACCGTCAACGGCGTAGCACAAAGTACGCTCAGAAGCTCATAACGATTGTTCAGGCACGCGGTGAGCCGGGAACCGGTTCGACCAAGCGCGTCACAAACCCGGTTTACCGTCTCAGCGTTTTCGAACCGGAAACGGGTCACTGGACCGAGCTGCCACCACCGCCCGAGTTTTATTCCGGGTTACCCATGTTCTGTCAGTTAGTGAGTGTCGGGTATGATCTTGTCTTGTTGGGCGGGTTGGACCCGAGTTCGTGGAGAGCATCGAATTCTGTGTTTGTGTACAATTTCTTGTCGGCGAAGTGGCGCCGCGCCGCGGACATGCCGGGTGGGCCCCGAACCTTTTTCGCGTGCGCGTCGGATTCTGAGGGGACGGTTTTTGTCGCCGGCGGACACGACAACGAGAAGAACGCGCTTCGTTCGGCGCTGGCTTATGATGTTAACTCGGACCGGTGGGTTTCGCTTCCCGACATGGCGGCGGAGCGCGACGAGTGCAAGGGCGTTTTCCGCCGCGGGAGGTTCATCGCCGTCGGGGGCTACCCAACGGAGACGCAGGGAAGGTTCGGCACGAGCGCGGAGGCCTTCGATCCTGCCACATGGCGCTGGGTCGAAGTGAAAGAGGACTTCCTGGATTGCGCCACGTGTCCGAGGACGTTTGTGAACGGTGGAGATGACGAGGCGGTGTTCTTGTGCAGCGGCGGGGACTTAATCTCGCTGCGCGGGGACACGTGGCAGAAGATGGCAACTGTCCCGAGGGAGATACGCAACGTGGCTTACGTTGGGGCGTTGGGTGGGACGCTGGTGTTGATTGGATCTAGCGGCTACGGTGAAGTCCACGTGGCTTTTGGTTTGGATTTGGAGAGCTGCAATTGGAGGAAACTTGAGAGCCCAGAGGGGTTCAGGGGCCATGTTCAAACCGGTTGCGTTTTGGAGATTTAG 1068 0.5899 MMELISGLPEDVARGCLIRVSYQQFSTVASVCRLWKSEIHAPEFHRQRRSTKYAQKLITIVQARGEPGTGSTKRVTNPVYRLSVFEPETGHWTELPPPPEFYSGLPMFCQLVSVGYDLVLLGGLDPSSWRASNSVFVYNFLSAKWRRAADMPGGPRTFFACASDSEGTVFVAGGHDNEKNALRSALAYDVNSDRWVSLPDMAAERDECKGVFRRGRFIAVGGYPTETQGRFGTSAEAFDPATWRWVEVKEDFLDCATCPRTFVNGGDDEAVFLCSGGDLISLRGDTWQKMATVPREIRNVAYVGALGGTLVLIGSSGYGEVHVAFGLDLESCNWRKLESPEGFRGHVQTGCVLEI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02376 355 Gene3D - 66 346 IPR015915 GO:0005515
Spst4g02376 355 SUPERFAMILY Kelch motif 77 341 IPR015915 GO:0005515
Spst4g02376 355 SMART kelc_smart 168 215 IPR006652 GO:0005515
Spst4g02376 355 SMART kelc_smart 117 165 IPR006652 GO:0005515
Spst4g02376 355 Pfam Kelch motif 106 156 - -
Spst4g02376 355 Pfam Kelch motif 166 201 IPR006652 GO:0005515
Spst4g02376 355 SUPERFAMILY F-box domain 4 56 IPR036047 GO:0005515
Spst4g02376 355 CDD F-box_AtAFR-like 4 48 - -
Spst4g02376 355 PANTHER OS02G0208700 PROTEIN 2 355 IPR044595 GO:0080037|GO:2000762
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02376 Spst-Chr4 64317425 64318492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02376 - - gmx:100796602 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02376 4 64317425 64318492 Spst4g02376 4 64317425 64318492 ECH
Spst5g00149 5 1430954 1432036 Spst4g02376 4 64317425 64318492 PCT