Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02320 ATGCTATCGCCGATTTTGCCCATGCCGGAAATCCCCGTCGATTTCCGCGCACCGCCGCCCTCTCCGGTGGCCTCCGGCAGGATATCCACCGTTACCAACGATGAAGTTTTGACGGAGTTTCTAGAGGCCTCGCTCCGCGTCCCTGATCTGGTACTGCCGGACAAGATCTTCCCCAAACAGAAGCACCTCCACGCGCCTCCCGAGGTTGATTTCGTGTCGCTATGTTTCCACCGCGACGAGGCTCTCCGCGACGTCGTTTCCGACTCTCTCACCAGGATCGGATGCTTCCAGTTGATCAACCACGGGATTCCGTCACAGCTCGTGGCCGCCGCCGCCGAGACCGCCGGCGGCGTGTTCCAGGTTCCGCATGGGAAGCGAACGTCGGCGACGAGGTCGCCGGAGAAACCTTGGGGATTCGAGGAGTATCACGCCGGAGAGGAGGAAGAAGAAGGGAGTGAAGAATTCGTGTGGTGCAAGGAGGAGGAGTTGAAGTCGAAAATGGAGGGAATTTGGCCAACTGGATATCCAAATTTCAGCGAAAAGATGGAAAAGCTTATGTCACGCATAGAGATGGTGGGTATGAAATTGTTGCCTGTGATATTGAAAAACAGAAGCATAGAATTTGTGGGTGGGAATGAGAGTGGGACTCTCTGTTGCGTTTGTAAGCATCATGGTGATAACAGCAGCGATGGATGGGCTAATTCCTTGAAATATGATGTGATTAGGATGCTGATTAGGGGAACAGATTACTCTCATTCATTGTGCTTCCATGTCTGCAATGGCTCTGCACATTTTCACCTTTACTCCAAGAAAACTTGGCTCTCTTTCTGCCCTCAACCAGGTGCCCTTATAGTTACTGCTGGAGATCAAACCCAGAAATTGAGTGGTGGAAAGTACAAACATGTGATTGGAAGACCATTCTTTAGCGCAGAGAATGAAGAGAGCATTTCAATGGCTTTCCTCTATTCTACTCAGAACACCAAGAACAATTTTGAAACCAGTAGGGGTAAAACCATTTCACTTTCCCAGCAAGCCATCTTGGCTTTAATTCTGCCCCTTCTGTACCATCTCATCATTTTTCTCTGCAAAAAACTTCATTAA 1101 0.4986 MLSPILPMPEIPVDFRAPPPSPVASGRISTVTNDEVLTEFLEASLRVPDLVLPDKIFPKQKHLHAPPEVDFVSLCFHRDEALRDVVSDSLTRIGCFQLINHGIPSQLVAAAAETAGGVFQVPHGKRTSATRSPEKPWGFEEYHAGEEEEEGSEEFVWCKEEELKSKMEGIWPTGYPNFSEKMEKLMSRIEMVGMKLLPVILKNRSIEFVGGNESGTLCCVCKHHGDNSSDGWANSLKYDVIRMLIRGTDYSHSLCFHVCNGSAHFHLYSKKTWLSFCPQPGALIVTAGDQTQKLSGGKYKHVIGRPFFSAENEESISMAFLYSTQNTKNNFETSRGKTISLSQQAILALILPLLYHLIIFLCKKLH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02320 366 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 9 360 - -
Spst4g02320 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 78 155 IPR026992 -
Spst4g02320 366 Gene3D - 51 337 IPR027443 -
Spst4g02320 366 SUPERFAMILY Clavaminate synthase-like 57 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02320 Spst-Chr4 63940623 63943056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02320 - - gmx:100799796 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02320 4 63940623 63943056 Spst4g02320 4 63940623 63943056 ECH
Spst5g00212 5 1825113 1827059 Spst4g02320 4 63940623 63943056 PCT