Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02236 ATGACTATGCCCATCTCTGCTATTTTTCTGTTGACTCTCTTTTCTGTCATTTATGGCACTGCATCTACCCATCATCTTCGTCACACTCTATCTTCTGATTCCTACCATCAACCTTACAGAACTGCTTATCACTTCCAACCTCCCAAGAATTGGATAAATGGACCATTGCGATATGGAGGACTTTATCACCTGTTCTATCAGTACAATCCTAAAGGTACTGTTTGGGGAAATATCATTTGGGCACATTCAGTGTCAAAGGATCTTGTGAACTGGACCCCACTAGATCCTGCTATCTTCCCATCTCAGCCATCTGATGTAAATGGTTGTTGGTCAGGATCAGCCACACTGCTTCCTGGGAACAAACCGGCCATTTTATACACTGGAATTAACCCATTGAATCAACAAGTCCAAAACTTGGCCAAGCCCAAAAATTTGTCTGACCCTTTTCTCAGGGAATGGGTTAAGTCGCCCAAAAATCCTCTAATGGCACCAACTAGTGCTAATAAGATCAATGCAAGTTCATTTAGGGACCCCACCACTGCTTGGCTAGGCCAGGATGGACATTGGAGAGTACTTGTTGGAAGCAAAAGGGGAACAAGGGGTATGGCACTTCTATATAGGAGCAAAGATTTTGTTGATTGGGTTCAAGCCAAAGACCCTTTGCATTCAATCCTAGGCAGTGGAATGTGGGAGTGTCCTGATTTTTTCCCGGTTTTGAATAATGGCCAGTTGGGTGTTGACACATCTGTGAATGGTGATTATGTCAGGCACGTGCTCAAGGTTAGCTTGGATGACAAAAAACATGATTACTACATGATTGGAAGTTACAATGCTGACAAGGATGCGTTTATCCCAGACAAAGGGTTTAATGAATTTGTTCTAAGATATGATTATGGAAAATACTATGCCTCAAAAAGTTTCTTTGATGATGGAAAGAAGAGAAGGGTTTTGCTAGGGTGGGTGAACGAATCATCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACAATTCCAAGGGCTATTTGGCTGCACAAGTCTGGTAAACAGCTGGTTCTGTGGCCAGTGGAGGAAATTGAAAAGCTACGTGCAAACCCTGTTAATTTGCCACCCCAAGTGTTAGAAGGAGGCAAGTTGCTTCAAATTAATGGTGTCACAGCAACACAGGCTGATGTGGAAATTTCATTTTCATTTGAAAAGAGTAAACTGAGAAAGGCTGAAGTACTGAACTATTGGAGGGACCCCCAAATTCTATGTAGCACAAAGGGTTCATCTCTTAGAAGTGAATTGGGTCCTTTTGGTTTGCTGGTTTTTGCTTCAGAAGGATTGCAGGAGTTCACATCAATTGATCATTCAGTGGTGGAGAGTTTTGAAGGAGAAGGAAGGGGGTGCATCACTGCCAGAGTTTATCCTACATTAGCAATAGATGATAAAGCACAAATATATGCTTTCAATAATGGTTCTGCTGAAGTGATGATCACAAGGTTGAGTGCTTGGAGCATGAAGAAAGCACAGATAAACTGA 1533 0.4214 MTMPISAIFLLTLFSVIYGTASTHHLRHTLSSDSYHQPYRTAYHFQPPKNWINGPLRYGGLYHLFYQYNPKGTVWGNIIWAHSVSKDLVNWTPLDPAIFPSQPSDVNGCWSGSATLLPGNKPAILYTGINPLNQQVQNLAKPKNLSDPFLREWVKSPKNPLMAPTSANKINASSFRDPTTAWLGQDGHWRVLVGSKRGTRGMALLYRSKDFVDWVQAKDPLHSILGSGMWECPDFFPVLNNGQLGVDTSVNGDYVRHVLKVSLDDKKHDYYMIGSYNADKDAFIPDKGFNEFVLRYDYGKYYASKSFFDDGKKRRVLLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVLWPVEEIEKLRANPVNLPPQVLEGGKLLQINGVTATQADVEISFSFEKSKLRKAEVLNYWRDPQILCSTKGSSLRSELGPFGLLVFASEGLQEFTSIDHSVVESFEGEGRGCITARVYPTLAIDDKAQIYAFNNGSAEVMITRLSAWSMKKAQIN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02236 510 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 452 509 - -
Spst4g02236 510 SMART glyco_32 44 490 IPR001362 GO:0004553|GO:0005975
Spst4g02236 510 Pfam Glycosyl hydrolases family 32 N-terminal domain 44 358 IPR013148 -
Spst4g02236 510 CDD GH32_Fruct1-like 50 347 - -
Spst4g02236 510 Gene3D Glycosyl hydrolase domain; family 43 48 368 IPR023296 -
Spst4g02236 510 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 48 370 - -
Spst4g02236 510 Gene3D - 452 504 - -
Spst4g02236 510 SUPERFAMILY Arabinanase/levansucrase/invertase 34 359 IPR023296 -
Spst4g02236 510 Gene3D - 369 451 - -
Spst4g02236 510 Pfam Glycosyl hydrolases family 32 C terminal 452 503 IPR013189 -
Spst4g02236 510 SUPERFAMILY Concanavalin A-like lectins/glucanases 358 506 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02236 Spst-Chr4 63146371 63150382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02236 58 510 Glycoside Hydrolase AT3G13790 54.475 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02236 K01193 - gmx:100777339 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00279 5 2472387 2472566 Spst4g02236 4 63146371 63150382 PCT