Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02215 ATGGAGCCATTTGCCATAGCAACACACAGAAATCTCAGTGTGCTTCACCCCATTTATAAACTACTCCATCCTCACTACCATGACACCATAAATATCAATTCACTTGCTAGGAAATCCCTTATTAATGCAGGTAGCATCATAGAGCAAACGTTTTTGCCTGGACGTTATTCTATGGAGATATCTTCTGCTGCATATAAGAAATGGCTTTTCACTGACCAAGCATTACCAAATGATCTCATCAAAAGAGGATTGGCAGTTAAGGATGACGGTTCCCCTCATGGTCTTCGCCTTCTGATAAAGGACTACCCTTATGCTGTCGATGGACTGGAAATATGGGATGCTATTAAGACATGGGTCCAAAACTATATCTTCTTGTATTACTCAACAGATGTGGCAGTTAAACAAGATTTTGAATTGCAAGAATGGTGGAAGGAAGTTGTGGAGAAGGGTCACCCTGACTTAAGAGATGCAAAATGGCCAAAAATGCAAACTCGTGAAGATCTGATTGACACTTGCACCATTATTATATGGATTGCTTCAGCTCTCCACGCTGCTGTTAATTTTGGACAGTATCCTTATGGAGGTTATATCCTGAACCGTCCAACACAAAGCAGAAGATGGATTCCAGAACCAGGAACTGAAGAGTATGATGAGATGGCCAAGAATCCTCAAGAAGCCTTTTTGAGAACAATTACACCAAAGTACCAGACCACTATTGATCTTACAGTGATGGAGGTACTGTCAAGTCATAGTTCTGATGAGGTGTACCTTGGACAAAGGGACAGTCTAGATTGGATCAGTGATGAAAAAGCAAAAGTTGAGTTTAACAAATTTACAAAATCCCTAGCAAAAATTGAGGAAGACATCTTGGACAGGAACATCAAGGAAGAACTAAAAAACCGAACTGGACCAGTCAAATTGCCCTACACTCTTCTTCTTCCTACCAGTAAACCAGGGATAACTTTTAGAGGAATCCCTAACAGTATCTCTATCTAA 996 0.4046 MEPFAIATHRNLSVLHPIYKLLHPHYHDTININSLARKSLINAGSIIEQTFLPGRYSMEISSAAYKKWLFTDQALPNDLIKRGLAVKDDGSPHGLRLLIKDYPYAVDGLEIWDAIKTWVQNYIFLYYSTDVAVKQDFELQEWWKEVVEKGHPDLRDAKWPKMQTREDLIDTCTIIIWIASALHAAVNFGQYPYGGYILNRPTQSRRWIPEPGTEEYDEMAKNPQEAFLRTITPKYQTTIDLTVMEVLSSHSSDEVYLGQRDSLDWISDEKAKVEFNKFTKSLAKIEEDILDRNIKEELKNRTGPVKLPYTLLLPTSKPGITFRGIPNSISI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02215 331 FunFam Lipoxygenase 1 330 - -
Spst4g02215 331 SUPERFAMILY Lipoxigenase 1 331 IPR036226 -
Spst4g02215 331 ProSitePatterns Lipoxygenases iron-binding region signature 2. 15 25 IPR020834 GO:0016702|GO:0046872
Spst4g02215 331 Gene3D - 1 330 - -
Spst4g02215 331 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 331 IPR013819 GO:0016702|GO:0046872
Spst4g02215 331 Pfam Lipoxygenase 1 314 IPR013819 GO:0016702|GO:0046872
Spst4g02215 331 PANTHER LIPOXYGENASE 1 331 IPR000907 GO:0016702|GO:0034440|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02215 Spst-Chr4 62891750 62892901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02215 1 331 Acyl Lipid Metabolism Gene Families AT3G22400 59.050 6.10e-144 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02215 K15718 - gmx:100802685 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02215 4 62891750 62892901 Spst5g00297 5 2580998 2581771 PCT