Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02213 ATGGCAGTAAAGGATCAGTCTGCTCCTCATGGCCTTCGCCTTGTGATAGAGGACTATCCTTATGCGGTCGATGGACTAGAAATATGGAGTGCTATTAAGATATGGGTCGAAGAGTACATCTCCTTGTATTACTCAACAGATGTGGTTGTTCAACAAGATACTGAATTGCAGGCATGGTGGAAGGAAGTTGTGGAGAAGGGTCATCCTGACTTAAAAGATGCAAAATGGCCAAAAATGCAAACTCGTGAAGATCTGATTGATACTTGCACCATTATTATATGGATTGCTTCAGCTCTCCATGCTGCTGTTAATTTTGGACAGTATCCTTATGGAGGTTATATCCTGAACCGTCCAACACAAAGCAGAAAATGGATCCCAGAACCAGGAACTCAGGAGTACGATGAGATGGCCAAGAATCCTCAAGAAGCTATTTTGAGAACAATTACACCAAAGTACCAGACCGTTATTGATCTTACAGTGATGGAGATTCTGTCAACACATGCTTCTGATGAGGTATACCTTGGACAAAGGAACAGTCCAAATTGGACCGCTGATCAAAGTGCAAAAGATGTGTTTGAAACATTTACAAAAACACTTGCAGAAATTGAGGTAAAAATCTTGGAGAGGAACCATAACGAAGAACTTAGAAACCGAACTGGACCAGTCAAATTGCCCTACACTGTTCTTCTTCCTACCAGTGAACCAGGGATTACTTTTAGAGGAATCCCTAACAGTGTCTCTATCTAA 747 0.415 MAVKDQSAPHGLRLVIEDYPYAVDGLEIWSAIKIWVEEYISLYYSTDVVVQQDTELQAWWKEVVEKGHPDLKDAKWPKMQTREDLIDTCTIIIWIASALHAAVNFGQYPYGGYILNRPTQSRKWIPEPGTQEYDEMAKNPQEAILRTITPKYQTVIDLTVMEILSTHASDEVYLGQRNSPNWTADQSAKDVFETFTKTLAEIEVKILERNHNEELRNRTGPVKLPYTVLLPTSEPGITFRGIPNSVSI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02213 248 PANTHER LIPOXYGENASE 1 248 IPR000907 GO:0016702|GO:0034440|GO:0046872
Spst4g02213 248 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 248 IPR013819 GO:0016702|GO:0046872
Spst4g02213 248 SUPERFAMILY Lipoxigenase 1 248 IPR036226 -
Spst4g02213 248 Gene3D - 1 247 - -
Spst4g02213 248 Pfam Lipoxygenase 1 231 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02213 Spst-Chr4 62874200 62874946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02213 1 248 Acyl Lipid Metabolism Gene Families AT1G55020 61.446 1.07e-106 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02213 K15718 - gmx:100802685 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02213 4 62874200 62874946 Spst5g00299 5 2590157 2594623 PCT