Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02186 ATGGATTTGCAACAAATTGGGCAGCCTAAATCATCTAATGGATATGGTCGTTGGAAATTTGAGAAAGAAGTGGCAACTAAGTCTGATAATAGGATCCCCTCTGGAAAGTCAAATGCCAGCAGCAGATTAGCAAGTACAGGTGTAGTGACTGGCAATAAAGGTGGTAGTTATGGGAGTCCTTCACATGATCGACTAGTATATTTAACAACATGCCTTATTGGGCAGCATGTGGAAGTCCAGGTGAAAAATGGATCTATTTACTCTGGAATATTTCATGCAACAAATACTGACAAAGATTATGGAATCATTTTGAGAATGGCTTGTTTGACAAAGGATGACTTTTTGCAAGGACAGAGATCTGATGTAGAACCTGTCAGCAAAGCTCCTTCTAAGACTCTAATTATACCTTCCAATGATCTTGTACAAGTTATAGCAAAGGATGTTTCTGTTTTCAGAGATGGCCAAACTAGTGAACCTCACTATGATATGCATCATGAGATCATGGTTGATTCAGTAATCTCCCAATCTCGTCATGTAGAGACAGGTAGAGAATTACAGCCATGGGTACCTGATGAAGATGATCCAGAATGTCCTGAACTGGAAAATATATTTGATGGCCCTTGGAATAGAGGATGGGATCAGTTTGAAACAAACAAAATGTTATTCGGTGTGCAAAGCACATTCAATGAGGAGTTATATACAACAAAGCTTGAAAAAGGACCTCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATTGCAAGAGAAATTGAGGGTGAGGAAACCCCAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTACCATAGCTTTGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTACAGTTGATGATATTGGATATGACGAAAATGAGGACAAGTTGGATTCACACAATTCTGAAACGTTTGATAATATTTATGGTTTAGTCATTAAGAGACCAGGTGAAGTAAGCCAGAAAGGAAATAATGCAGCTCAAACATGGTCAAATTTCTCCTCTGTGGGTCACTCAGAGTTATGTCATTCAAGTACTGGTATGGATTCGTGTCGTACTGGTTCTAATGACCATGCTAAGCAGTTAGCATCTGAACTGCCTGCCCAGAGTTGTTCACATTCAGATGGTGAAAGCAGGATTCAGGAGAACTCAGCTAATAACCTACATGGAGCCAATGATAATACTGTGGAAGAAAAGTGGATACAAGCTGAGGATGTCCAACTGTCAAAATCTCAGGATATACAGTCATCACTTAAATCGAAGAAAGCTGGTTCTGAAGAAGGGGGGTTATCTCCTAACGGGGCCTCCTCTGCCTCTTCTACTCATATTTTATCGAAAGCTCTTGAAGAAACTGTGTCGGTTGGAGAAACGAAGTCTGTAATTTCACGTGGAAGACTAGGTGGTTGTACATCCTCTGGTCCTGGTATATCACCAAGTTCTTCGGTTGGTTCACTGTCTTCGGAGAAGTCAACTCTCAATCCCTATGCCAAGGAGTTCAAACTCAACCCTAATGCAAAGAGTTTTATGCCATCCCAAGCACATGCTAGGCCCCGCTCCCCAGCGTCTGATGGTTCCTTCTATTACCCAGCTGCTGTATCCTCCGTACCAAATATGCCAGCTATGCCCATGGGTATTGGAGTTGGAACTACTTTTGCAGGTCCACAGCCTGTCATGTATAATCCACAAGTGGCACAAATGCCATCGCAGCCATATTTTCATCCAAATGGACCACCGTATGGACAACTTCTTGGTCATCCTAGGCAAATTTTATACGTGCCAAGTTACCAACCTGTAAGGACTCGCATGAGATGCCGTATAAGGGACGGGATTACTGACCGCCTAGTTGATTGCATTCCTGGCACTTCGGATCCATGCCTGAAAAGAATGAACCAAGTGGATGGCTTAAAGAATAAGAAGAAGGAAATAGAAGGGCGTGAGATTGGAAGGAGCATTGAAGGAGCGTGGAGAGCATTTAAGAGGAACACAGAAGTCTATGGAGTAGGAGGCATCACAGTCTGA 2043 0.4229 MDLQQIGQPKSSNGYGRWKFEKEVATKSDNRIPSGKSNASSRLASTGVVTGNKGGSYGSPSHDRLVYLTTCLIGQHVEVQVKNGSIYSGIFHATNTDKDYGIILRMACLTKDDFLQGQRSDVEPVSKAPSKTLIIPSNDLVQVIAKDVSVFRDGQTSEPHYDMHHEIMVDSVISQSRHVETGRELQPWVPDEDDPECPELENIFDGPWNRGWDQFETNKMLFGVQSTFNEELYTTKLEKGPQTRELEKQALRIAREIEGEETPDLHLAEERGLYHSFDIDEETRFSSVYRGTVDDIGYDENEDKLDSHNSETFDNIYGLVIKRPGEVSQKGNNAAQTWSNFSSVGHSELCHSSTGMDSCRTGSNDHAKQLASELPAQSCSHSDGESRIQENSANNLHGANDNTVEEKWIQAEDVQLSKSQDIQSSLKSKKAGSEEGGLSPNGASSASSTHILSKALEETVSVGETKSVISRGRLGGCTSSGPGISPSSSVGSLSSEKSTLNPYAKEFKLNPNAKSFMPSQAHARPRSPASDGSFYYPAAVSSVPNMPAMPMGIGVGTTFAGPQPVMYNPQVAQMPSQPYFHPNGPPYGQLLGHPRQILYVPSYQPVRTRMRCRIRDGITDRLVDCIPGTSDPCLKRMNQVDGLKNKKKEIEGREIGRSIEGAWRAFKRNTEVYGVGGITV 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02186 680 MobiDBLite consensus disorder prediction 415 446 - -
Spst4g02186 680 MobiDBLite consensus disorder prediction 415 430 - -
Spst4g02186 680 MobiDBLite consensus disorder prediction 471 497 - -
Spst4g02186 680 PANTHER ATAXIN 2-RELATED 34 605 IPR045117 GO:0003723
Spst4g02186 680 SMART LsmAD_2 222 291 IPR009604 -
Spst4g02186 680 MobiDBLite consensus disorder prediction 30 45 - -
Spst4g02186 680 MobiDBLite consensus disorder prediction 352 388 - -
Spst4g02186 680 MobiDBLite consensus disorder prediction 480 497 - -
Spst4g02186 680 Pfam LsmAD domain 222 290 IPR009604 -
Spst4g02186 680 MobiDBLite consensus disorder prediction 26 45 - -
Spst4g02186 680 Pfam Ataxin 2 SM domain 62 146 IPR025852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02186 Spst-Chr4 62607538 62621723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02186 - - gmx:100778053 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02186 4 62607538 62621723 Spst4g02186 4 62607538 62621723 ECH
Spst5g00307 5 2629390 2641604 Spst4g02186 4 62607538 62621723 PCT