Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01855 ATGTCCACCATGAAGAACAATTTCAAAGACCCTGACCATTTATACTCTTCATGGAGCTTCTCAAAGCTAATGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTCAGCCACTCCTATGAATGTGATCAGCCCCCCCACATTCCCACCATCATTCACCAGCACATATCCAACATCCCACCTCAAGAAGAGTCCCCACCTCAAGAAGAGTTCCCACCCTTTGAAGAAACCAACCTTTCCCACATAGTCTTCGGCATAGGGGCCTCAGCCAAGCTTTGGAAGCAGAGAAAAGAGTACATCAAGATGTGGTGGAGGCCCAATGAGATGCGTGGAGTTGTGTGGCTAGAGCAGAAGGTGAAAACTGAACCTGGTGATGAGAATTCCTTGCCCCGGTTGAGGATCTCTAGTGACACTTCAAAGTTCAAGTATAAGAATCCAAAGGGGCATAGATCAGCTATTCGGATCTCACGCATAGTGTCCGAGACACTCAGGCTTGGGATGAAGGATGTGAGGTGGTTCGTGATGGGGGATGATGACACCGTTTTTGTGACAGAAAATTTGGTGAAGGTTTTGCAGAAGTATGACCATAATCAGTTCTATTACATAGGAAGTTCTTCAGAGAGTCACTTGCAAAATATATACTTTTCATATAATATGGCTTATGGGGGTGGTGGATTTGCAATTAGTTATCCTTTGGCTGTGGCATTGGAGAAAATGCAGGATAGGTGCATTCAGAGGTACCCTGGTTTGTATGGCTCTGATGATAGGATGCAGGCTTGTATGGCAGAATTAGGAGTTCCACTCACCAAGGAGAAAGGGTTTCATCAGTTCGATGTGTACGGGAATCTCTTTGGGCTTCTCGCGGCCCATCCGGTTACGCCACTGGTGTCCCTCCATCACTTGGACGTGGTAGAGCCCATATTTCCAAACGTGAGCCGGGTGCAGGCCCTGAAGCGGCTGAGCGGGCCCATGAAGCTGGACCCAGCGGGGCTGATGCAACAATCCATTTGCTACGACAAGGCCCGGACCTGGACCATATCCGTTTCATGGGGATACGCGGTTCAAATATTCCGAGGCATCTTCTCGGCCCGGGAAATGGAGATGCCGGCGAGGACGTTCCTGAACTGGTACAAACGGGCCGATTACACGGCGTACCCTTTCAACACCCGCCCCGTCAGCCGCCATGTTTGTCAGAAACCTTTTGTCTATTTCTTGTCGGAGGCAATGCACGATGAGGGTGCCAATCAAACTTCTAGTAAATATATACGGGTTCAGCAAAACCCTGATTGCAAGTGGAAAATGGAGGATCCAACCCGGATCAAATTGGTGGTCGTTCACAAGAAACCCGACCCGCATTTATGGGACAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGTACAAAGAAGAAGGGAACTTTGTTGATTGATGTGGGGAAATGCAGGGAAGATGAAGTTGTTGAATTGTCGTTATCTCGCACATCAATTCATAATTCTTAA 1521 0.4799 MSTMKNNFKDPDHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYECDQPPHIPTIIHQHISNIPPQEESPPQEEFPPFEETNLSHIVFGIGASAKLWKQRKEYIKMWWRPNEMRGVVWLEQKVKTEPGDENSLPRLRISSDTSKFKYKNPKGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVQALKRLSGPMKLDPAGLMQQSICYDKARTWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFVYFLSEAMHDEGANQTSSKYIRVQQNPDCKWKMEDPTRIKLVVVHKKPDPHLWDKAPRRNCCRVRRTKKKGTLLIDVGKCREDEVVELSLSRTSIHNS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01855 506 FunFam Fringe-related protein-like 77 332 - -
Spst4g01855 506 Pfam Protein of unknown function, DUF604 218 470 IPR006740 -
Spst4g01855 506 Gene3D - 78 327 - -
Spst4g01855 506 PANTHER FRINGE-RELATED 21 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01855 Spst-Chr4 58882611 58885523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01855 21 490 Glycosyltransferase AT5G41460 65.644 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01855 - - gmx:100789583 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01855 4 58882611 58885523 Spst4g01855 4 58882611 58885523 ECH
Spst1g01104 1 13460897 13464092 Spst4g01855 4 58882611 58885523 PCT