Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01104 ATGAACAACAACCTCAAGGATCACGAACACTACTTCCACTCTTCATGGACCATAGCAAAACTAACGACCTCCTTCTTCCTCTTGGTCTCCATCTGCTACCTCTTCTACTCCCTTGGATTCATCACTCATTCCTACGATTGTCCTCCAAAAAAGCCTTACCCTCATCCCACTACCACACACTTTTCCATCACCCCCACCACTCCTGCCCCACCTCAAGAGACCCAAAAACCCTTTGAGAAAACCAACATTTCCCACATAGTGTTTGGCATAGGGGCCTCATCCAAGCTATGGAGCCAAAGAAAAGAGTACATGAAGCTATGGTGGAGGCCAAACGAAACAAGAGGAAATGTGTGGCTTGACGAAGAAGTGAGAAGTGAACCAGGTGATGAGACCCTCTTACCAACATTGAGAATTTCAAGTGATGTCTCAATGTTCAAGGTCAAGAATCCACGTGGCGAGAGGTTGGGAATTCGGATATCTCGGATTGTGTCTGAGACAGTGAGGCTTGGGATGGAGAATGTGAGGTGGTTTGTGATGGGGGATGATGACACTTTCTTTGTGACCGAGAATTTGGTGAAGGTGTTGCAGAAGTATGATCACAACCAGTTCTATTACATAGGGACCAATTCCGAGAGCCACTTGCAGAACATTCACTTTTCTTATAACATGGCTTATGGGGGTGGAGGGTTTGCCATAAGTTACCCTTTGGCTGTGGCATTGGAGAGAATGCAGGACCAGTGCCTTCAGAGGTACCCTGCATTATTTGGGTCAGATGATAGGATCCAGGCTTGTATGGCAGAGCTTGGTGTCCCTCTCACCAGGGAAAATGGCTTTCACCAGTTTGATGTATATGGCAATGTGTTTGGGCTCTTAGCAGCACATCCCACCACACCTTTAGTTTCCATGCATCACTTGGACGTGGTTGAGCCCATATTCCCAAACGCAAACCGAGTGGAGGCCCTACAGAAGCTCATTGGGCCCATGAGACTGGACTCGTATGGGCTCATGCAGCAATCCATATGCTACGATAAAGCCCGGTTCTGGACCATATCCGTTTCATGGGGCTATGCGGTTCAAATATTCCGGGGCATTTTCTTGGCCCGGGACATGGAGATGCCCGCAAGGACATTTCTGAATTGGATCCGGCGGGCGGATTATACCGGTTTTCCGTTCAACACGCGCCCTTTTAGCCGGAATGTTTGCCAGAAACCTTTTGTTTTCTACTTGGATAATGCCATTTATGATGGGGTTGCTGATGAGACTGTGAGTGAGTATATCCTGGTCCAGCCCAACCCGGATTGCAAGTGGAAAATGCCGGATCCGACTCAAATCCGAATGATAAGGGTTCACAAGAAACTTGATTCGCATTTGTGGGACAAGTCTCCAAGGAGAAATTGTTGCAGGTTTCAACCGACAAAGGAGGAAGGAACTATGGTGATTGAGGTGGGAGAATGCAGGAAAGATGAATATGCTGATTAA 1479 0.476 MNNNLKDHEHYFHSSWTIAKLTTSFFLLVSICYLFYSLGFITHSYDCPPKKPYPHPTTTHFSITPTTPAPPQETQKPFEKTNISHIVFGIGASSKLWSQRKEYMKLWWRPNETRGNVWLDEEVRSEPGDETLLPTLRISSDVSMFKVKNPRGERLGIRISRIVSETVRLGMENVRWFVMGDDDTFFVTENLVKVLQKYDHNQFYYIGTNSESHLQNIHFSYNMAYGGGGFAISYPLAVALERMQDQCLQRYPALFGSDDRIQACMAELGVPLTRENGFHQFDVYGNVFGLLAAHPTTPLVSMHHLDVVEPIFPNANRVEALQKLIGPMRLDSYGLMQQSICYDKARFWTISVSWGYAVQIFRGIFLARDMEMPARTFLNWIRRADYTGFPFNTRPFSRNVCQKPFVFYLDNAIYDGVADETVSEYILVQPNPDCKWKMPDPTQIRMIRVHKKLDSHLWDKSPRRNCCRFQPTKEEGTMVIEVGECRKDEYAD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01104 492 Pfam Protein of unknown function, DUF604 215 467 IPR006740 -
Spst1g01104 492 MobiDBLite consensus disorder prediction 57 75 - -
Spst1g01104 492 FunFam Fringe-related protein-like 73 329 - -
Spst1g01104 492 PANTHER FRINGE-RELATED 16 489 - -
Spst1g01104 492 MobiDBLite consensus disorder prediction 56 75 - -
Spst1g01104 492 Gene3D - 73 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01104 Spst-Chr1 13460897 13464092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01104 81 492 Glycosyltransferase AT4G23490 66.587 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01104 - - gmx:100777888 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01104 1 13460897 13464092 Spst4g01855 4 58882611 58885523 PCT