Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01852 ATGGCTCAAGAAACTGTGATGAAAAGGTCACCCTCTCATGAAAAATTTCACAGGGTTCAATTTGCAATAAGGATTTTGGTGCTGGTTCTGTTCTTGGGTTGGATCTTCATTTGGATAATGGCACCCACAGATATTTATAGACAAAGATGGCTTCCTAGATTCAGAGCAAAGATTAACAATACAACTTATTTTGGTTCATCAGGTGCTAATCTTCTGATGTACACTTTCCCAATCTTGCTCATAGCCACTTTGGGGTGTGTGTATCTCCACATAGGCAAAAGAGCAAATGGTTCCAACACGGAAAGCGGCAATTCAAAGAAAGATGAGGTAACCATATGGAAGCGTTCAGTGCTTAGAAAAGGCCCACTTGGCATTGTTTCTGTCACAGAGTTTGCATTCTTGCTTATGTTCATTGCACTCCTTGTCTGGTCCTTTGCACTTGGTTTACGCAACAGCTTTGCAAATATCACCCCCGCATCAGCAGCACAGGATTCCCAGAAAATATGGGAAGAGAAGCTAGACAGTGCAGCACTAAGGTTTGGTATGGTTGGGAGCATATGTTTGGTATTCATGTTTTTTCCTGTGGCTCGTGGTTCATGCGTGTTGCCACTGCTTGGACTCACCTCTGAGAGTTCCATCAAGTACCATATTTGGCTTGGACACATTGCAATGGTACTCTTCACTACTCACGGCTTCTGCTACATTATCCATTGGGCAGTTATGCATCAACTTTCATCGATGCTGGAATGGAAGAAAAATGATATATCAATTGTGGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTACTATGGATTGTAACCATTCCCCGCATTAGGCGAAAAGTTTTTGAGCTCTTCTTTTACGCTCATTACCTCTACATCCCCTTCATAGTCTTCTTCGTCTTTCATGTTGGCATGTCCTATGCTTACATCATGCTCCCTGGTTTCTACCTCTTCATGGTTGACCGTTACTTAAGGTTTCTGCAATCAAGGCGCCATGTGCGTTTGGTTTCTGCTCGGGTTTTGCCATGTGAAGCTGTAGAACTCAACTTCTCTAAGAGCCATGGATTAACTTATAACCCCACAAGTGTGATGTTCATAAATGTACCAAGCATATCCAAGCTGCAGTGGCATCCATTTACCATTTCGTCAAATAGTAATTTGGAGCTAGACAAGCTAAGTGTTGTTATTAAAGGTGAAGGAACTTGGACCAAGAAGCTATACCAGTTGCTTTCAACTCCTTCCACGATAGATCGCCTTTCTGTATCTGTTGAAGGTCCTTATGGACCCGCTTCAACCAACTATCTAAGGCATGACACTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATATCCATCATTCGGGAGCTAATATATCTGAACACTGCATTCAAATGCAAAACCCCAAAAGTAGTCCTAATCTGTGCCTTCAAGAACTCTTCATCTCTGTCAATGCTAGATTTGATCCTCCCAATATCTGGCACCCCTTCTGAGATTTCTAATATGGAATTACAAATTGAGGCCTACATCACAAGGGACAAGGAGTTTAAAGCGGATGGCGTGATTCAACCTCAAACCATATGGTTCAAGCCAAATCCATCTGATGAACCAGTACATGCCATATTTGGTCCTAACAGCTGGCTCTGGCTTGGTGCTATAATCTCATCCTCTTTCGTCATTTTCCTTATCTTAATAGGGCTCATTACCCGTTACTACATATTCCCTATTGATCATAACTCAAACCAAATATTCTCGTACCCCTTGAAAGCATTCCTTAACATGCTAGTAATATGTGTGTCCATAGCAACTGTTTCTAGTGCAGTTGTTCTTTGGAACAAGAAACATAATGCTAAAGAAGCAAAACAAATTCAGAACGTAGAAGGGTCTACACCAACAGTGTCGCCAAACTCCATGGTATACAATGCAGATAGAGAACTGGAAAGCCTTCCATATCAATCACTTGTTCACGCCACCACTGTGCATTATGGTGTAAGACCTGATCTAAGAAGACTCCTATTTGAATACAGAGGGTCAAGTGTGGGAGTTTTTGCTTCAGGACCCAACATAATGAGGCACGAGGTTGCAGCCATTTGTTCATCTGGTTTAGCTGAGAATATGCATTTTGAATCCATTAGCTTTAGCTGGTGA 2157 0.421 MAQETVMKRSPSHEKFHRVQFAIRILVLVLFLGWIFIWIMAPTDIYRQRWLPRFRAKINNTTYFGSSGANLLMYTFPILLIATLGCVYLHIGKRANGSNTESGNSKKDEVTIWKRSVLRKGPLGIVSVTEFAFLLMFIALLVWSFALGLRNSFANITPASAAQDSQKIWEEKLDSAALRFGMVGSICLVFMFFPVARGSCVLPLLGLTSESSIKYHIWLGHIAMVLFTTHGFCYIIHWAVMHQLSSMLEWKKNDISIVAGEISLLAGLLLWIVTIPRIRRKVFELFFYAHYLYIPFIVFFVFHVGMSYAYIMLPGFYLFMVDRYLRFLQSRRHVRLVSARVLPCEAVELNFSKSHGLTYNPTSVMFINVPSISKLQWHPFTISSNSNLELDKLSVVIKGEGTWTKKLYQLLSTPSTIDRLSVSVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIYLNTAFKCKTPKVVLICAFKNSSSLSMLDLILPISGTPSEISNMELQIEAYITRDKEFKADGVIQPQTIWFKPNPSDEPVHAIFGPNSWLWLGAIISSSFVIFLILIGLITRYYIFPIDHNSNQIFSYPLKAFLNMLVICVSIATVSSAVVLWNKKHNAKEAKQIQNVEGSTPTVSPNSMVYNADRELESLPYQSLVHATTVHYGVRPDLRRLLFEYRGSSVGVFASGPNIMRHEVAAICSSGLAENMHFESISFSW 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01852 718 Pfam Ferric reductase like transmembrane component 180 300 IPR013130 -
Spst4g01852 718 Pfam Ferric reductase NAD binding domain 438 702 IPR013121 GO:0016491
Spst4g01852 718 SFLD Ferric Reductase Domain 44 718 - -
Spst4g01852 718 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 422 493 IPR039261 -
Spst4g01852 718 Pfam FAD-binding domain 334 432 IPR013112 GO:0016491
Spst4g01852 718 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 329 434 IPR017927 GO:0016491
Spst4g01852 718 PANTHER NADPH OXIDASE 24 716 - -
Spst4g01852 718 SFLD Ferric reductase subgroup (FRE) 8 718 - -
Spst4g01852 718 CDD NOX_Duox_like_FAD_NADP 336 515 - -
Spst4g01852 718 FunFam Ferric reduction oxidase 3 427 544 - -
Spst4g01852 718 Gene3D - 422 544 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01852 Spst-Chr4 58854469 58858280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01852 10 718 Miscellaneous Gene Families AT1G01580 57.580 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01852 K00521 - gmx:100790114 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01101 1 13451597 13452792 Spst4g01852 4 58854469 58858280 PCT