Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01844 ATGGGTGTTGCGGCGTCTCCGTCGCGTGGGAGCTGGGTGTCTCTGTTGCGTGGGTGCTGCGGAGTCTCCGTCGTGTTGTTGCGTGTGTTGTTACTTTTTTGTTGTTCTCTTGACCTCTGCTCCGCGGACGATGAATTTGTTGGAGCCACTGATAATGTCTTCACTGTTTCCAGCTTCAGCTACCCTCAGACTACTCTCAGACCCTTTGATTTGCGCTACATCAGAGTTGATATACCACCATGGTTTTCAGCAGTGTCCATAGCATTGAACTCAGATGTAGACCTTGATGTTTCAAGAGTTGAAAGAATTCCAAAAAGTTCACTGCCAATCATATGCTTTAGAGATGGCAGCCCTCCTCTGCCAGATGCTTTAAACACATCTCTGAAGGATTCAGCTGTCACAGGAATAAATGGTCTTGACATCGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACAAACGAACAGATCTATGATGACATAGTTGTATCTGCGTTAATATCTCCAGGTGCTTGGTATATCGGCCTTTTCAATGGCATTGGAGCTGCAAGAACACAATCGAAGATGATTATCCGAGGCTCAGCATACTCCTTCAGTGCCAACATAAGTGTGGAAGCATGCTCAAATTCAATGATGAAAGGGGAGTTATGTAACAGTACAGTCTATCCACTTTCATGCACAGTATCTGATGTCTATAATTCAGTGAAGGCTACAGTGAAGAATCCAATGATGGAAAATGTGATGACCTGCAAAAGTAACCTAGATACATTTTGTGCTCAGGAAGGTGTACCAGAACTTTACTCCTTGGATGTAACAAATATGGCAGAAGAGTTGACCATTATGGTGGCAAATGTTAAATTCAATACTACAGCTTCAAATAACACTTCTAGTGCAAATGATGCCAGTTTAATGTGTTTTGTTCGCCATGGTGCAATTCCTTCAGAGACTTTGCATGATTTTTCCAGTGATTTAAACAAGGCCGCTCTGATTATCCGTTATCCACAGATTGGACGTTTGTACATTAGTATAGTACCAGTTAATGTTTCAAAAAAGTTTGGAGTGACTCCGTATGGCAATTTAAAAGTTTGCTACTCCATGGAATCACAAGTACTTCAGTGCGCACTTGGGAAAGCAGGGCCAAATTGCACAATGGACAGATACACACTTCAGACTGTTCTAAGGAGAGGGGGTCCAATCCCCTTTGAATCATATTTTTTACCTGTGGCTGATGGTGTAAAAGCATCTGCTGCCAACTTTCCTCTTGAGCCACTTTTAACCACGTCATCACACTCAGGAAAAACTGATGACATTTGGACTTATTTTACTTTGGACATTCCCCGTGGTGCAGCTGGACGGAATATTCACATACGATTATCGGCAGATGTCAAGATCAGTTATGAAGTTTATGCTAGATTTGGTGGATTGCCTTCTCGTGATAACTGGGACTATTATTATGCTAACAGGACAAGGAAGAGTGAACAGTCCATGTTTTTCATGCTATATGATTCAAGTGATGACAAAATTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGGGTTTAGGTCTAAGACATCTTTATACCAGCAGTGATTCTATGAAAGCACAAACAGTCATGTCCATTTCACTTGAAGGATGCCCAAAACAGTGCTCCTCTAATGGAGACTGTAAATATTCTTTTGATGCCAGTGGATTGACATCATTCAGTTTCTGCTCCTGTGATCGAAACCATGGTGGCTTTGACTGTAGCATTGAAATTGTATCACATAAAGGGCATATACTGCAATCCATTTTTCTCATTGGATCAAATGCTGCAGCCATACTTCCTGCGTATTGGTCCCTTAGGGAAAAGGCATTTGCAGAATGGGTTTTATTCACATGCAGTGGAATTGCTAGTGGGATATATCACGCATGTGATGTTGGCACCTGGATTCTCATTCTTCAGTGGATGATTTATGCTGTGAATTCCCAGGCCTTGGGTTTCATGGATTTCTGGCTCTCTTTCATGGCTGTGGTTAGCACTTTTGTATACCTAGCAACCATTGATGAAGTATATAAGAGGGCAATCCACACAATCGTTGCTATCCTCACCGCCCTCTTGGCTTCAACTAAGGCAACTAGGTCTTCCAATATTGTTCTTGTCATTGTGATAGGGGCTCTTGGTCTTCTTATTGCATGGTTGATAGAAATCTCAAAAAGATATAGGTCCCTCTCCTTTTCATTTGGATTATCACTGAGTTTCCTTCAAAGGGCTGATAGAATCATGATCTGGCTCATGCAAACTATGAAGCAATGGTTCTGTAATTTGGTGAAGACGCTTTTGAGACGGTTTCGCTGGGGTTTTCTGGTGGTTGGTTTCATTACATTGGCCATGGCAGGATTAAGCTGGACGCTTGAAACCAGTTCAAACTACTGGCTTTGGCATAGCTTTTGGCACATTACAATATACACATCTTCTTTCTTCTTCCTTTGCTCAAAAGCAAACATTGCTGATGCTGAAATTTCACCACCTTCAAGTGGAAACTATGCACTGACTCGTCAGGATTCATTTCCAAGAGTTGGATTAGAAGAACATATGTGA 2592 0.4163 MGVAASPSRGSWVSLLRGCCGVSVVLLRVLLLFCCSLDLCSADDEFVGATDNVFTVSSFSYPQTTLRPFDLRYIRVDIPPWFSAVSIALNSDVDLDVSRVERIPKSSLPIICFRDGSPPLPDALNTSLKDSAVTGINGLDIEQCFPMEKNITMKLTNEQIYDDIVVSALISPGAWYIGLFNGIGAARTQSKMIIRGSAYSFSANISVEACSNSMMKGELCNSTVYPLSCTVSDVYNSVKATVKNPMMENVMTCKSNLDTFCAQEGVPELYSLDVTNMAEELTIMVANVKFNTTASNNTSSANDASLMCFVRHGAIPSETLHDFSSDLNKAALIIRYPQIGRLYISIVPVNVSKKFGVTPYGNLKVCYSMESQVLQCALGKAGPNCTMDRYTLQTVLRRGGPIPFESYFLPVADGVKASAANFPLEPLLTTSSHSGKTDDIWTYFTLDIPRGAAGRNIHIRLSADVKISYEVYARFGGLPSRDNWDYYYANRTRKSEQSMFFMLYDSSDDKIDFYIIYAREGTWGLGLRHLYTSSDSMKAQTVMSISLEGCPKQCSSNGDCKYSFDASGLTSFSFCSCDRNHGGFDCSIEIVSHKGHILQSIFLIGSNAAAILPAYWSLREKAFAEWVLFTCSGIASGIYHACDVGTWILILQWMIYAVNSQALGFMDFWLSFMAVVSTFVYLATIDEVYKRAIHTIVAILTALLASTKATRSSNIVLVIVIGALGLLIAWLIEISKRYRSLSFSFGLSLSFLQRADRIMIWLMQTMKQWFCNLVKTLLRRFRWGFLVVGFITLAMAGLSWTLETSSNYWLWHSFWHITIYTSSFFFLCSKANIADAEISPPSSGNYALTRQDSFPRVGLEEHM 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01844 863 ProSitePatterns EGF-like domain signature 1. 575 586 IPR000742 -
Spst4g01844 863 Pfam Protein of unknown function (DUF3522) 596 817 IPR021910 GO:0016020
Spst4g01844 863 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 26 857 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01844 Spst-Chr4 58774028 58793559 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01844 - - gmx:100777848 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01096 1 13398117 13402756 Spst4g01844 4 58774028 58793559 PCT