Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01836 ATGGCTATGAGTGGCTTAATTTCAAATCGCAACTTCGGTTGCTTCGTTGCATCAGGAAATGTATATAGATCGGGAAAGGATATATCGGTTGAAAGAGGGGATGTTTCTATTTCTGGTGTTTCTGTTACACAGGATCCCTTTTCAAGATGGCAGCATAAGATGTTTTTGCCTTTGGAAGAGAGAATTTCGAAATCAATGCAAAAATCTCACAAAAAAGGGCAGCATTGTTCTCTTCTATCCCGGCAGTCCAGTCAGTGCTTGAGCTTTAAACTACAGGCTAGCGGAAGAAGTGGTTGTTCCTCTCTTTCGTCTGCTTCTTATAGCAGTGGCAATAATCAACAAAGGGAAGTATATGGTCTTGGTTTGAGCAGAAGAAAGCATGCACAACCTGAGGTTGGTAAACCAAATAAGTTCCGTGTTTGTTATAAGTCTGAGGACTATAACATTTCGGAAACAAAGATAGATCCACTGCAATCAACTGAAGGGACTGGGGAAGCCATTCTTCTGGAAGGAAATCTGCAGCAAGTATCACCGTGGTGGCAACAGTTTCCTAAGCGCTGGGTTATTGTCCTGCTGTGTTTTTCAGCCTTTTTACTGTGTAACATGGATCGTGTAAATATGAGCATAGCAATACTTCCGATGTCTCAAGAATTCAACTGGAACAGTGCAACAGTTGGCTTAATTCAGTCATCTTTTTTCTGGGGTTATCTACTTACTCAGATTGTTGGTGGCATATGGGCAGACAAAATTGGTGGGAAGTTAGTACTAGGTTTTGGAGTTGTCTGGTGGTCAATTGCAACAATTTTAACACCTATTGCTGCAAAACTTGGGCTGCCATTTCTTCTTATAATGCGTGCCTTTATGGGAATTGGCGAGGGTGTTGCGATGCCCGCAATGAATAATATACTTTCCAAATGGATTCCAGTATCAGAGAGAAGCAGATCACTTGCGCTAGTATATAGTGGCATGTACCTTGGTTCTGTCACAGGCTTGGCATTCTCACCTGTGCTTATCCAGAAATTTGGGTGGCCATCGGTGTTTTACTCATTTGGATCCCTTGGAAGTATCTGGTTTGTTTTATGGTTGAGTAAAGCATACAGCTCACCAAAAGAAGACCCAGACCTTGGGTCAGAAGAGAAGAAGCTCATACTTGGAGGCAATGTATCAAAAGAACCTGTATCAGTTATTCCTTGGAAATTAATTTTATCAAAAGCACCTGTTTGGGCTTTAATAATTTCTCACTTTTGCCACAATTGGGGGACATTTATTCTATTAACCTGGATGCCTACTTACTACAATCAGGTTCTGAAGTTCAATCTCACTGAATCTGGGCTATTTTGTGTCCTTCCATGGTTAACCATGGCTATTTTTGCAAATATAGGAGGCTGGATTGCTGATACACTTGTGAGCAAAGGCTTTTCCATAACATCTGTTCGAAAGATTATGCAATCAATCGGGTTTTTAGGTCCTGCATTTTTTCTTACACAGCTAAGCCATGTGAGAACACCCGCTATGGCAGTACTTTGCATGGCTTGCAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTGTATTCCAATCATCAAGACATTGGACCACGCTATGCTGGAGTGTTGCTGGGACTATCAAATACTGCAGGAGTGCTTGCTGGTGTATTCGGTACAGCTGCAACTGGATACATACTCCAACGAGGTTCTTGGGATGATGTATTTAAGGTTGCTGTTGTATTGTACATAGTAGGCACATTGATCTGGAATATCTTTTCAACTGGAGAGAAAGTTCTTGACTGA 1791 0.4171 MAMSGLISNRNFGCFVASGNVYRSGKDISVERGDVSISGVSVTQDPFSRWQHKMFLPLEERISKSMQKSHKKGQHCSLLSRQSSQCLSFKLQASGRSGCSSLSSASYSSGNNQQREVYGLGLSRRKHAQPEVGKPNKFRVCYKSEDYNISETKIDPLQSTEGTGEAILLEGNLQQVSPWWQQFPKRWVIVLLCFSAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQIVGGIWADKIGGKLVLGFGVVWWSIATILTPIAAKLGLPFLLIMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPVLIQKFGWPSVFYSFGSLGSIWFVLWLSKAYSSPKEDPDLGSEEKKLILGGNVSKEPVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAIFANIGGWIADTLVSKGFSITSVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVVLYIVGTLIWNIFSTGEKVLD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01836 596 Pfam Major Facilitator Superfamily 193 554 IPR011701 GO:0022857|GO:0055085
Spst4g01836 596 ProSiteProfiles Major facilitator superfamily (MFS) profile. 189 593 IPR020846 GO:0022857
Spst4g01836 596 Gene3D MFS general substrate transporter like domains 184 373 IPR036259 -
Spst4g01836 596 FunFam ascorbate transporter, chloroplastic isoform X1 394 594 - -
Spst4g01836 596 Gene3D MFS general substrate transporter like domains 401 593 IPR036259 -
Spst4g01836 596 SUPERFAMILY MFS general substrate transporter 176 588 IPR036259 -
Spst4g01836 596 CDD MFS_SLC17A9_like 190 589 IPR044777 -
Spst4g01836 596 PANTHER SOLUTE CARRIER FAMILY 17 179 593 - -
Spst4g01836 596 FunFam ascorbate transporter, chloroplastic isoform X2 184 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01836 Spst-Chr4 58699524 58705053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01836 1 596 Organic Solute Cotransporters AT4G00370 71.500 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01836 K08193 - gmx:100793618 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01836 4 58699524 58705053 Spst4g01836 4 58699524 58705053 ECH
Spst1g01080 1 13243185 13248647 Spst4g01836 4 58699524 58705053 PCT