Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01814 ATGAAGGTTACTACCTCAATAGCAGCATCCTTTGTTCTGCTACTCATTCTGATTTCAGCAAATTGTTTGTGTTGTGAAGCACAACAGTGTCGTCCTAGTGGCAGAATCATTGGAAAGAAGCCCCCACCAGGAGAATGCAACCAAGAGAATGATTCAGACTGTTGTGTCCAAGGCAAGAGTTACACAACATACAAATGTTCTCCAGCAGTGTCAAGCAACAACGAGGCCCAACTCACTCTCAACAGTTTTGAAAAGGGTGGAGATGGAGGAGGGCCTTCAGCATGTGACAACCAGTACCATTCTGATGACACACCAGTGGTTGCACTTTCCACTGGATGGTTTAACAATATGAGTAGGTGCCTCCATAACATTACCATCAGTGCAAATGGCAAAAGTGTTGTGGCCATGGTGGTGGACGAATGTGACTCTACCATGGGATGTGATGAAGATCATGATTATCAACCCCCTTGTCACAACAACATTGTTGATGCCTCCAAGGCTGTCTGGAAAGCCTTAGGTGTGCCTCAAAATCAATGGGGAGGACTGCAAATTACATGGGCTGATGCTTAA 570 0.4544 MKVTTSIAASFVLLLILISANCLCCEAQQCRPSGRIIGKKPPPGECNQENDSDCCVQGKSYTTYKCSPAVSSNNEAQLTLNSFEKGGDGGGPSACDNQYHSDDTPVVALSTGWFNNMSRCLHNITISANGKSVVAMVVDECDSTMGCDEDHDYQPPCHNNIVDASKAVWKALGVPQNQWGGLQITWADA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01814 189 CDD DPBB_kiwellin-like 61 188 - -
Spst4g01814 189 Gene3D - 73 188 IPR036908 -
Spst4g01814 189 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 7 188 IPR039271 -
Spst4g01814 189 SUPERFAMILY Barwin-like endoglucanases 76 187 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01814 Spst-Chr4 58334314 58334883 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01814 - - gmx:100785431 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01814 4 58334314 58334883 Spst4g01814 4 58334314 58334883 ECH
Spst1g01061 1 12917167 12917733 Spst4g01814 4 58334314 58334883 PCT