Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01061 ATGAAGAGGCTTTGCTCAAAGGCATCCTTCATTTTATTAGCCACTCTCATCTTAACAAGTTGCATTGACTCTGAGGCTCAAAAGTGTCGCCCAAGTGGAAGAATAAGAGGAAAGAAAGCCCCTCCAGGAGAATGCAACCAAGAGAATGATTCTGACTGTTGCGTAGATGGCAAAATGTACACAACATACGAATGTTCACCACCTATGTCCAGCCACACCAAGGCCCATCTCACTCTCAACAGTTTTGAGAAGGGTGGTGATGGTGGTGGCCCTTCAGAATGTGACAACCAGTACCATTCTGATGACACACCGGTCGTAGCACTGTCTACAGGGTGGTTCAACCACAAGAGCAGGTGCCTCCACAACATCACCATTAGTGGGAATGGTAGAAGTGTGGTGGCCATGGTGGTTGATGAGTGTGACTCAACACAGGGATGTGATGCAGACCATGACTATCAACCTCCATGTCCCAACAACATTGTAGACGCTTCAAGGGCTGTATGGAAAGCCTTAGGAGTGCCCCCAAATGAGTGGGGTGGCTTTGATATCACATGGTCTGATGCTTGA 567 0.4797 MKRLCSKASFILLATLILTSCIDSEAQKCRPSGRIRGKKAPPGECNQENDSDCCVDGKMYTTYECSPPMSSHTKAHLTLNSFEKGGDGGGPSECDNQYHSDDTPVVALSTGWFNHKSRCLHNITISGNGRSVVAMVVDECDSTQGCDADHDYQPPCPNNIVDASRAVWKALGVPPNEWGGFDITWSDA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01061 188 CDD DPBB_kiwellin-like 60 187 - -
Spst1g01061 188 Gene3D - 73 187 IPR036908 -
Spst1g01061 188 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Spst1g01061 188 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 10 187 IPR039271 -
Spst1g01061 188 SUPERFAMILY Barwin-like endoglucanases 67 186 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01061 Spst-Chr1 12917167 12917733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01061 - - vra:106758388 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01061 1 12917167 12917733 Spst1g01061 1 12917167 12917733 ECH
Spst1g01061 1 12917167 12917733 Spst4g01814 4 58334314 58334883 PCT