Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01785 ATGGGAGAAGCTACAGAAAGGTATGCAATTGTGACAGGTGCAAATAAAGGAATTGGTTTACAGATAGTGAAACAGTTAGCATCAGCAGGAATCAAGGTGGTGGTCACAGCAAGAAATGAGGAGAAGGGTCTTCAAGCATTGGAAACACTCAAAGCCTCAGGTTTATCTCACCTTGTACTGTTTCATCAGCTAGATGTGGCTGATGCTGCAAGTGTATCTTCTCTGACAGATTTTATCAGATCCAAATTTTGGAAACTTATCATGCAACTTTTGGAAATATCAGAAGATGAAGTAAGAAAGGGAATTACTGAAACATACGACTTAGCTGAAGAATGCTTGCAAATAAATTATTATGGAGTCAAGATGACTGTGGAATCCCTCGTGCCCCTCCTAAAGTTATCTGATTCACCAAGAGTTGTCAATGTGTCATCCTTTATGGGGCAGTTAGAGAGTTTCCCAAAAGGATCATGGGTGAGAGGAGTGTTGAGTGATGTTGATCACCATGGCTACACAAGAATTCTTGCTAAGAAATACCCTTCATTTTGCATCAATTGTGTTTGCCCTGGTTATGTGAAGACAGAGATAAATGCCTTCACTGGCTCCTTAACTCCTGCAGAAGGTGCTGTGGTCCTGTGA 636 0.4119 MGEATERYAIVTGANKGIGLQIVKQLASAGIKVVVTARNEEKGLQALETLKASGLSHLVLFHQLDVADAASVSSLTDFIRSKFWKLIMQLLEISEDEVRKGITETYDLAEECLQINYYGVKMTVESLVPLLKLSDSPRVVNVSSFMGQLESFPKGSWVRGVLSDVDHHGYTRILAKKYPSFCINCVCPGYVKTEINAFTGSLTPAEGAVVL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01785 211 Gene3D - 3 211 - -
Spst4g01785 211 Pfam short chain dehydrogenase 8 197 IPR002347 -
Spst4g01785 211 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 203 IPR036291 -
Spst4g01785 211 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Spst4g01785 211 PRINTS Glucose/ribitol dehydrogenase family signature 179 196 IPR002347 -
Spst4g01785 211 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Spst4g01785 211 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 169 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01785 Spst-Chr4 57955552 57957241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01785 10 200 Acyl Lipid Metabolism Gene Families AT1G24360 23.618 3.53e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01785 K15095 - gmx:100801677 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01785 4 57955552 57957241 Spst4g01785 4 57955552 57957241 ECH
Spst4g01785 4 57955552 57957241 Spst1g01040 1 12788090 12798070 PCT