Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01756 ATGGGTGGTAGTTTTTCCTCTTGTGTTTGTGATGGGGATGCAACCCCTATGAGGCCAAGGCTTGGAGATTTACCCGAGAGCTGTGTGGCATTGTTGTTGATGTATTTGGACCCACCAGATATTTGCATGCTTGCACGATTGAACAGGGCGTTTCGCGATGCTTCGTTAGCTGATTTCATTTGGGAATCAAAGTTGCCTTTGAATTATAAGTTCATCGTGGAGAAAGCTTTGAAGGATGTTTCTGTAGAAGACTCGGGGAAGAGGGATATTTATGCTAGACTCTGCAGGCCTAATTTGTTTGACAACGGGACCAAGGAAATTTGGCTGGATAAGAGGACGGGTGGGATGTGTATGGCGATTTCTTCCCAAGCGTTGAGGATTACAGGGATAGATGATCGGAGATATTGGAGTCGCATTTCGACAGAAGAGTCAAGATTCCATACAGTTGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGATGTTGATTTTCAATTTCCACCTGGGACATACAGTGTTTTCTTCAGACTCCAGCTTGGCCGATCTTCCAAGAGACTAGGTCGTCGAGTTTGTAAGACTGATGATATTCATGGTTGGAATATAAAACCTGTAAAATTTCAGCTAACAACTTCTGATGGTCAACATGCTGTATGCCAAACTCATTTGGATAACCATGGGCACTGGGTTCTCTACCACGCAGGAAACTTTGTTTCTAAGAATCCAAATGATCTGATGAAGGTCAAATTTTCATTGGCTCAGATTGATTGCACGCATACCAAAGGTGGTTTGTGTGTAGATTCTGTTTTTATATGCAATAGTGATGTAAAACAAGAGTTGTAG 846 0.4243 MGGSFSSCVCDGDATPMRPRLGDLPESCVALLLMYLDPPDICMLARLNRAFRDASLADFIWESKLPLNYKFIVEKALKDVSVEDSGKRDIYARLCRPNLFDNGTKEIWLDKRTGGMCMAISSQALRITGIDDRRYWSRISTEESRFHTVAYLQQIWWLEVEGDVDFQFPPGTYSVFFRLQLGRSSKRLGRRVCKTDDIHGWNIKPVKFQLTTSDGQHAVCQTHLDNHGHWVLYHAGNFVSKNPNDLMKVKFSLAQIDCTHTKGGLCVDSVFICNSDVKQEL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01756 281 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Spst4g01756 281 PANTHER F-BOX PROTEIN PP2-A15 10 279 - -
Spst4g01756 281 Pfam Phloem protein 2 116 272 IPR025886 -
Spst4g01756 281 CDD F-box_AtSKIP3-like 21 66 - -
Spst4g01756 281 SUPERFAMILY F-box domain 18 94 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01756 Spst-Chr4 57628559 57630279 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01756 - - gmx:100814033 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01756 4 57628559 57630279 Spst10g01014 10 10790579 10793305 ECH
Spst4g01756 4 57628559 57630279 Spst4g01756 4 57628559 57630279 ECH
Spst4g01756 4 57628559 57630279 Spst10g01014 10 10790579 10793305 PCT