Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01721 ATGGAACTGGTTGGACATGCTGCAAGTTTGAATGGGGTTGGAGATGCTGCACGTTTCGATGGGGTTGGACATGCATCTAATACCATACAGCACCACCATAGACATGTGTTGCTTGTGGTGGAAAATGGGCATGGATTGAGGGAACTTCCTCAAGGTGTGGTTATTGCTAAGGAGGAAAGTGTTTTGACTGTGGTTGGAAGATTAGGGACTGTGGTGATGGTTGATATGATGGGTTCTGTGATTCTCAGATGGGAAACCTTTGCAGTAATAATGTTAAGGTTTCAGTTTGGTAGGGGTGCATGCTTGATGTTGGCTCTAGAACTGGATGCTGCCAAGACATGCATTGGAGTGTTGGTGTCAGAATCCACCTTAACATATCAAGATTATATTTCAGATGTTCCAAGTAAAGAGGGTAGCAAATGGAGTGAATGGCAGGCACTGCAGGACCTTAAATCACTTTTTTCAGAAGAGGTTCTTGATGTTATTGTATCCAGAACAAATGATATGGGACCTTTTAGTCTTGACAACTTCAGAAAGAATTTGTCTGCTTCATGGAAAGTTGTTGGATTAGAAAATTCAAACACTGGACATGAGCTAAACCAATCAACACATGTTAGACAAGAAAAGCCAAAGGTGAAGGAAGGAAGATCTTCAGATGGTGCTATATGGACTGATAGTCTTGCTCATGAAACCCGAAGGCACTTAATAGAGAAAAGACGGGAAAAACGTGCCGCTGAGTTGGTAAAAAAGGACAATGAAGGAACTGTAAAACTTGAAAATTTAGCTATTGAACGCTCAAAATCTGTTGACTCAGCCATTCTGGGTAAATACAGCCTTTGGAGGAAAGAAATTGATAACGAAAATGGTGATTCTACTGTTCGGTTGATGCGAGACCAGATCATTATGGCTAGGGTATATTTAAGCATTGCAAAGATGAAGAACAAGGTCGAACTGTATCAAGAACTAATTTTCCACCTCAAAGAGAGCCAACGTGCCTTAGGTGATTTAGTTTCTGATGCGGATCTACATCACAGTGCACATGGGAAAATAAAGGCTATGGGTCGAGTTTTGTCAAAAGCAAGGGAGCTATTGCATGACTGCAAATTGGTCACTGGAAAACTAAGAGCAATGCTACAGACAGCTGATGATCAAGTTAGGAGTTTGAAGAAACAGAGCACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATCCATTGCTTATCCATGCGCCTCACCATAGATTACTACCTTCTTCCTCCTGGAAAGAGAAAGTTCCCTAGGAGTGAGAATTTGGAGGATCCCAGCCTTTATCACTATGCACTTTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTACAAATGCAAAGGATCCTTCGAAGCATGTTTTTCACCTTGTTACTGATAAGCTAAATTTTGGTGCCATGAACATGTGGTTTCTATCGAACCCTCCCGGAAAGGCTACAATCCATGTTGAAAATGTTGATGAGTTTAAGTGGCTGAACTCGTCCTACTGCCCAGTCTTGCGGCAGCTTGAATCTTCTACAATGAAAGAGTTTTATTTCAAGGCAGGCCATCCAAACACACTTTCTTTCGGTGCTTCCAGTCTGAAGTATAGGAATCCAAAATATCTCTCAATGCTCAACCATCTGAGATTCTATCTTCCCGAGGTTTATCCAAAGTTAGATAAAATCCTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGCCTATGGGCTGTGGATCTCAATGGGAAGGTAAATGGTGCTGTTGAAACGTGTGGTAAGAGCTTTCACCGATTTGACACGTACCTTAACTTTTCAAATCCGCATATTGCAAGAAATTTTGATCCACAAGCCTGTGGTTGGGCATATGGGATGAACATATTTGATTTGAAGGAGTGGAAAAAGAAGGATATCACCGGAATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACATTACCTCCGGGGCTAATGACGTTTTATGGGCTGACACATCCTCTAGATAAATCATGGCATGTACTAGGTTTGGGTTATAATCCAAGTGTGGACCGATCAGAGATTGATAATGCAGCAGTGGTACACTACAATGGTAATATGAAGCCATGGTTAGAAATTGCCATGACAAAGTATCGGTCTTACTGGATCAAATATGTCAAGTACAATCATCCCTATCTTCGGACCTGTAAGCTAAATGAATAA 2256 0.4149 MELVGHAASLNGVGDAARFDGVGHASNTIQHHHRHVLLVVENGHGLRELPQGVVIAKEESVLTVVGRLGTVVMVDMMGSVILRWETFAVIMLRFQFGRGACLMLALELDAAKTCIGVLVSESTLTYQDYISDVPSKEGSKWSEWQALQDLKSLFSEEVLDVIVSRTNDMGPFSLDNFRKNLSASWKVVGLENSNTGHELNQSTHVRQEKPKVKEGRSSDGAIWTDSLAHETRRHLIEKRREKRAAELVKKDNEGTVKLENLAIERSKSVDSAILGKYSLWRKEIDNENGDSTVRLMRDQIIMARVYLSIAKMKNKVELYQELIFHLKESQRALGDLVSDADLHHSAHGKIKAMGRVLSKARELLHDCKLVTGKLRAMLQTADDQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPGKRKFPRSENLEDPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHLVTDKLNFGAMNMWFLSNPPGKATIHVENVDEFKWLNSSYCPVLRQLESSTMKEFYFKAGHPNTLSFGASSLKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWAVDLNGKVNGAVETCGKSFHRFDTYLNFSNPHIARNFDPQACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLDKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRSYWIKYVKYNHPYLRTCKLNE 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01721 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 442 745 IPR029044 -
Spst4g01721 751 MobiDBLite consensus disorder prediction 202 218 - -
Spst4g01721 751 SUPERFAMILY Nucleotide-diphospho-sugar transferases 440 748 IPR029044 -
Spst4g01721 751 Pfam Glycosyl transferase family 8 409 725 IPR002495 GO:0016757
Spst4g01721 751 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 244 749 IPR029993 GO:0047262
Spst4g01721 751 MobiDBLite consensus disorder prediction 196 218 - -
Spst4g01721 751 CDD GT8_like_1 440 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01721 Spst-Chr4 57151457 57158962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01721 97 751 Glycosyltransferase AT3G61130 70.526 0.0 955
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01721 K13648 - gmx:102664546 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01721 4 57151457 57158962 Spst4g01721 4 57151457 57158962 ECH
Spst1g00983 1 12063233 12073793 Spst4g01721 4 57151457 57158962 PCT