Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00983 ATGGACCGTCAAATTGTACATAAGATTACACCTCAAAAACCAGAAGTGCAAGAGGTGGATTCAAAAACTTGTAAAACAACATCTTCAGACATTGAAAAATTGAATCAAATATCATTTTGCAAACATCCGCAATGGCACCCAACAACAACAGAACCAAGGGATCGCATTTTCCCCTTCTTGCCTTCCTCCTTCTGTGCCTCCTCGTGCCCGTTCTCTTCTTCTGCGCATCGCCCCTTCACACTCTTCACGGTTGCCAGATTCAGAGTGTGGCAGTCATTGCAGGACCTTAAACCTCTTTTTTCGAGAGAGATTCTTGATGTCATTGTGTCCAACACAAATGATGTGGGCCCTTTGAGTCTTGAGAGTTTTAGAAAAAATAATTTGTCTGTCTCATGGAGAGTTGTTGGATCAAAGGCTTCTGATGCTACAAATCAGGTTAACGAACCAGCAAACAATGTAGGACAAGAGAAGCAAAATGGGAAGGAAGGAAGATTTTCAGTTGGTCGTGCTCAGTGGACTGACAGTCCTGCACAGCTATCCAGAAGGCAATTAATAGATAAAAGGAAGGAGAAGCGTGCTGCTGAGCTGGTAAAACAGGATGATGAAGTAATTGTAAGACTTGAAGATTCAGCTATTGAACACTCGAAATCTGTTGATTCAGCAGTTCTAGGGAAATACAACATTTGGAGGAAAGAAAATGAGAATGAAAATGCTGATTCTACTGTAAGGTTGATGCGAGACCAAATCATTATGGCTAAGGTTTACTTGAGTATTGCTAAGATGAATCACAATCATCAACTGTACCAAGAACTGGAATCTCGGCTAAAAGAAAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGATCTAAATCAGAGTGATCATGAAAAAATCAAAACTATGGGCCAAGTTCTTTCCAAGGCAAAAGAACAATTGTATGACTGCAAGTTGGTTACTGGGAAACTGAGGGCAATGCTACAAACAGCTGATGAGCGGGTTAGGGGCTTGAGAAAACAAAGCACGTTTCTTAGTCAGTTGGCTGCCAAGACCATACCAGATGGAATTCACTGCTTATCTATGCGTCTTACCATAGACTACTTCCTCCTTCCTCTTGAAAAGAGAAAATTCCCTAGAAGTGAGAATTTGGATAATCCTAGTCTCTATCATTATGCCCTATTCTCGGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTGTGAACGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAGCATGTGGTTTCTGTTGAATCCTCCAGGAAAAGCTACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGAGGCAGCTTGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACTACTACTGGTGCTTCAAATCTCAAGTACAGAAATCCAAAATATCTGTCAATGCTTAACCACCTCAGATTCTATCTTCCACAAGTTTATCCCAAATTGGACAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAGGATCTGACTGGATTATGGGCTGTGAATCTTCATGGAAAAGTAAATGGTGCTGTTGAAACATGTGGTGAGAGTTTTCACCGATTTGATAAGTACCTTAACTTCTCAAATCCACATATTGCAAAAAATTTTGATCCAAATGCTTGCGGTTGGGCATACGGGATGAACATGTTTGATTTGAAGGTGTGGAGAAAGAAGGACATCACTGGCATATATCACAAGTGGCAGAATTTGAATGAAGACAGGGTGCTGTGGAAGCTGGGGACATTGCCTCCAGGGCTGATGACATTCTATGGATTAACACATCCGCTAAATAAATCATGGCATGTGCTTGGTCTGGGTTACAATCCAAGTGTAGATCGTTCAGAGATAGATAATGCAGCAGTCGTACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTATCGACCTTACTGGACCAAGTATGTCAAATATAGTCATCCCTATCTCCAGAACTGTAAGCTACGTGAATGA 2097 0.4092 MDRQIVHKITPQKPEVQEVDSKTCKTTSSDIEKLNQISFCKHPQWHPTTTEPRDRIFPFLPSSFCASSCPFSSSAHRPFTLFTVARFRVWQSLQDLKPLFSREILDVIVSNTNDVGPLSLESFRKNNLSVSWRVVGSKASDATNQVNEPANNVGQEKQNGKEGRFSVGRAQWTDSPAQLSRRQLIDKRKEKRAAELVKQDDEVIVRLEDSAIEHSKSVDSAVLGKYNIWRKENENENADSTVRLMRDQIIMAKVYLSIAKMNHNHQLYQELESRLKESQRALGEATSDADLNQSDHEKIKTMGQVLSKAKEQLYDCKLVTGKLRAMLQTADERVRGLRKQSTFLSQLAAKTIPDGIHCLSMRLTIDYFLLPLEKRKFPRSENLDNPSLYHYALFSDNVLAASVVVNSTIVNAKDPSKHVFHLVTDKLNFGAMSMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWRKKDITGIYHKWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYSHPYLQNCKLRE 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00983 698 Coils Coil 268 288 - -
Spst1g00983 698 CDD GT8_like_1 389 685 - -
Spst1g00983 698 SUPERFAMILY Nucleotide-diphospho-sugar transferases 389 695 IPR029044 -
Spst1g00983 698 Pfam Glycosyl transferase family 8 358 672 IPR002495 GO:0016757
Spst1g00983 698 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 191 696 IPR029993 GO:0047262
Spst1g00983 698 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 391 694 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00983 Spst-Chr1 12063233 12073793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00983 59 698 Glycosyltransferase AT3G61130 72.136 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00983 K13648 - gmx:100798073 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00983 1 12063233 12073793 Spst4g01721 4 57151457 57158962 PCT