Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01687 ATGTTAAAGAACCACTGTAGTTGTTTCATGTCGTTCACAGGACCCGGTTCAGTGTTTTTTCGCTCCGTTGCCAGCAGTTGTAGCAAGAGGAGGAGCATATGCTGGAAGCCTCCACAAGCATCTTCATCAATTGATTTTCACCTCTCAATGAGCAGTTCAGTGGGAAAAAGCAGGACATCGATTGAGGAAACAAGGAGTCTGCGATTGATAACTGCGGTTAAAACTCCATACCTACCTAACGGCAAAATTGATCTTGATGCATATGATAACTTGGTGGATATGCAGATAGCAAATGGCATTGAAGGTATTCTTGTTGCAGGCTCAACTGGTGAAGGCCAACTAATGACCTGGAGTGAACAAATAATGCTTATTGCACACACAGTTAACTGTTTTAGAGACAAAGTTAAGGTTGTTGGTAATGCTGGAAGCAACTGCACATCAGAGGCAATTAAGGCCACTGAGAGGGGTTTTGCTGTTGGAATGAATGCTGCACTTCATATAAACCCTTACTATGGAAAAACCTCATTGGATGGTTTGATTGCTCACTATAACAGTGTACTTGCCATAGGCCCCATCATCATATATAACATACCTACAAGGACTAATCAAGATATTCCTCCTAGTGTAGTTCAAACCTTGGGTCAAAGTTCTAATTTGGTTGGTGTCAAGGAGTGTGTGGGAACTGAGAGGATCAAACAGTATACAGATGAAGGGATTGTTGTATGGACAGGAATTGATAAAATAAGCCATGATGCTAGATGGGATTTTGGTGCTGTTGGAGTTCAATCTGTTGCTGGCAACTTGGTTCCTGGTTTGATGAGAGAACTCATGTTTGAAAGTAAGAATCTGATTCCTCTATTTGATTGGCTTTCTCAAGAGCCTATCCCTATTGCTTTGAACACTGCTCTTGCTCAACTTGGGGTCATCAAACCAGTTTTCAGGCTACCCTATGTTCCCTTGCCTGTGGATAAAAGGATAGAGTTTGTCAATTTGGTGAAGAAAATGGGTCGAGACCATTTTGTTGGAGAAAAAGATGTTCAAGTTCTTGATGATGATGACTTTATCATAACGAAGGTGAATGGAGGGCGGAGGTCCGTGAAGGAGCGCCTTAATGGGAATGGTACTAGTGGTCTTACTCGGCTGCACTACAAAAAAGCAAAGCCTTCAACCCTTTTGTTTGAACTTGTTCTTTCTTACTACTCTCGGGGTATTATGGTTGGCATGATCATGGAGTTCAGATCCAAGTCATGCAGAGATGAAAGGCTCCAGATTGAAAGCAACGGTGGAGGCAAGGTGGCCCCAACAAGCATGCAAGATCTGAGGTGTCAGAGTGCTAAAAATGCTTCTTCTGGTCGTGCACACCAGATAGGTAGCACTGGTAAGGAGGTGAAG 1392 0.4296 MLKNHCSCFMSFTGPGSVFFRSVASSCSKRRSICWKPPQASSSIDFHLSMSSSVGKSRTSIEETRSLRLITAVKTPYLPNGKIDLDAYDNLVDMQIANGIEGILVAGSTGEGQLMTWSEQIMLIAHTVNCFRDKVKVVGNAGSNCTSEAIKATERGFAVGMNAALHINPYYGKTSLDGLIAHYNSVLAIGPIIIYNIPTRTNQDIPPSVVQTLGQSSNLVGVKECVGTERIKQYTDEGIVVWTGIDKISHDARWDFGAVGVQSVAGNLVPGLMRELMFESKNLIPLFDWLSQEPIPIALNTALAQLGVIKPVFRLPYVPLPVDKRIEFVNLVKKMGRDHFVGEKDVQVLDDDDFIITKVNGGRRSVKERLNGNGTSGLTRLHYKKAKPSTLLFELVLSYYSRGIMVGMIMEFRSKSCRDERLQIESNGGGKVAPTSMQDLRCQSAKNASSGRAHQIGSTGKEVK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01687 464 MobiDBLite consensus disorder prediction 443 464 - -
Spst4g01687 464 Pfam Dihydrodipicolinate synthetase family 67 334 IPR002220 GO:0016829
Spst4g01687 464 ProSitePatterns Dihydrodipicolinate synthase signature 1. 102 119 IPR020624 GO:0016829
Spst4g01687 464 SUPERFAMILY Aldolase 69 335 - -
Spst4g01687 464 PANTHER DIHYDRODIPICOLINATE SYNTHASE 53 345 IPR002220 GO:0016829
Spst4g01687 464 ProSitePatterns Dihydrodipicolinate synthase signature 2. 195 225 IPR020625 GO:0016829
Spst4g01687 464 Gene3D Aldolase class I 61 360 IPR013785 -
Spst4g01687 464 CDD DHDPS 68 332 IPR005263 GO:0008840|GO:0009089
Spst4g01687 464 PRINTS Dihydrodipicolinate synthase signature 190 207 IPR002220 GO:0016829
Spst4g01687 464 PRINTS Dihydrodipicolinate synthase signature 135 153 IPR002220 GO:0016829
Spst4g01687 464 PRINTS Dihydrodipicolinate synthase signature 99 120 IPR002220 GO:0016829
Spst4g01687 464 PRINTS Dihydrodipicolinate synthase signature 167 183 IPR002220 GO:0016829
Spst4g01687 464 SMART DHDPS_2 66 336 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01687 Spst-Chr4 56600084 56610489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01687 K01714 - gmx:100806626 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00963 1 11846159 11850165 Spst4g01687 4 56600084 56610489 PCT