Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01683 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAGCCTGGTCGTGGTTCCCGCGCTCGAGAAGATAATCAAGAACGCGTCGTGGCGAAAGCACGCCAAACTCACTCACGAGTGCAAATCCGTCATCGAGAGGCTTGGCCACCGGCACTTTCCGCCGCCGGGATCTCCCACCGACACCGAACCGGAGACCAACGTACCTGGCCCGCTCCATGACGGTGGTCCAGTGGAGTTCTCCTTGGCCGAGTCCGAATCGATCCTCGCGCCACTCATCCATGCAGCCGGCTCCGGCGTCCTCAAGATCGCTGATCCTGCAGTCGACGCCATCCAGAAGCTCATTGCGCATGGCTACCTCCGAGGCGAGGTTGACCCGGACTCCGCCGCTGCCGCGCCGGAGGCGAGGCTCCTCTCCAACCTCATAGAATCGGTTTGCAAATGCCACGATTTCGGCGACGAGTCGATGGAGTTGCTGCTCCTCAAGACCTTGCTCTCTGCTGTGACGTCGATTTCGCTTCGAATCCATGGAGATTCCTTGCTTCTCATTGTGCGGACCTGCTATGATATATATCTCGAGAGTAAGAATGTGGTGAATCAGACGACGGCGAAGGCTTCGCTGATCCAAATGCTGGTGATTGTATTCCGCCGCATGGAGGCGGATTCCTCCACGGTGCCGGTTCAGCCGATTGTGGTGGCAGAATTGATGGAGCCTGTGGAGAAATCCGATGGGGACAATTCAATGACGCAGTTTGTGCAGGGCTTTATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGATGCCGAGTGGGAAGGTTCATTTGTTAGGTGGGCACGACGGTGCTTTTGAGACCACCACGGTGGAGACTACGAATCCTACTGATTTGTTGGATTCTACTGATAAGGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTAGAGGGACGGAAGGGGGAGCTTGTTGATGGGGAAGTGGTGGATAGGGACGATGATTTAGAAGTTCAGATTGGGAACAAGTTGAGGAGAGATGCTTTTTTGGTGTTTAGGGCGCTTTGTAAGTTGTCGATGAAAACGCTTCCGAAGGAGGCGATAGGGGACCCAGAGTTGATGAAGGGGAAGATTGTGGCTCTGGAGTTGCTGAAGATTTTGCTGGAGAATGCGGGGGCTGTGTTCAGGACTAGTGAAAGGAGTGAACTTGATTTGCATTGTCTGGATGTTCTGTCTAGGAGTGAACATGGTGACTTGATTGCATTCTCCGGATGCTCTTATGAAAAGAACTCCCTAGTAAAGGCTCTAAGGGGAAAGGGTGGCCTATGCCTTTTCTCTAGCATCAATGTTTTGACTTCAAGAAACATGACTTGGTTTTTAGGTGCCATCAAGCAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTCTAATTGTGTTTCAGCTGTCATGCTCCATTTTCATCAGTCTGGTGTCAAGATTTAGGGCTGGATTGAAAGCAGAAATTGGAGTATTTTTTCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAACCTAATTTTCAGCAGAAGATGATAGTGCTTCGGTTTCTGGAAAAGCTCTGTGTTGATTCACAGATATTGGTTGACATATTTATAAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAACAACCACACTTTTGCCACCCCAGGAAGCAACACTAAAACTTGAATCCATGAAAAGCTTGGTTGCAGTTTTAAAATCAATGGGAGATTGGATGAACAAACAATTGCGCATTCCTGACCCTCATTCAGCCAAGAAAGTTGAAGCATTGGATTACAGCCCTGAAACTGGAGGTTTTACCATGGTAAATGGGAATGGAGAAGACGCTGTTGATGGATCTGACACTCAATCAGAAGCCTCCAATGATGCTTCTGATGTTTCAAATATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTTAATAGGAAGCCTAAGAAAGGAATTGAGTTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAGAGGATATAGCTACTTTTCTTAAAGAAGCATCTGGGTTGAACAAGACTTTGATTGGTGATTATCTGGGAGAAAGGGAAGAGTTACCCTTGAAGGTAATGCATGCATATGTGGATTCCTTTAACTTTCAAGGTATGGAGTTTGACGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCACAGAAAATTGATAGGATCATGGAAAAGTTTGCCGAACATTACTGCAAATGTAATTCAAAGGCCTTTTCTAGTGCCGACACAGCGTATGTCCTTGCCTATTCTGTTATAATGCTTAATACAGATGCTCACAATCCTATGGTGAAGAATAAGATGTCTGCTGATGATTTCATAAGAAACAATCGAGGCATTGATGATGGAGAAGATCTTCCTGAGGAATACTTGAAGTCCTTGTTTGACAGAATATCTAGAAACGAGATCAAAATGAAAGAAAATGATGTGACTCCTCAACAAAAACAAGCTGTGAACCCTAATAGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAACATGATGAAGAGAATCTGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAAAACTGAATCAGTTTATTACGCCGCAACAGATGTTGTAATTCTGAGATTCATGATTGAGGTGTGCTGGGCACCGATGTTAGCCGCCTTCAGTGTTCCACTTGATCAAAGTGATGATGAGGTTGTAATATCTCTGTGCCTTGAAGGCTTCCGCTATGCTATTCATGTTACTTCCGTAATGTCAATGAAGACTCATAGAGATGCTTTTGTGACTTCATTAGCAAAGTTTACCTCACTACATTCACCAGCAGATATTAAGCAGAAGAATGTCAATGCAATTAAGGCAATAGTTGTTATTGCTGATGAGGATGGAAATTACTTACAAGAAGCTTGGGAACACATCTTGACTTGTGTTTCTCGGTTTGAGCATTTACATCTTCTTGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCTTTCCCTCAGAATGATTCAGAAAAAGCAAAGCAAACAAAGTCAACCATTCTTCCTGTCTTGAAGAAGAAGGGACCTGGGAGGATGCAGTACGCAGCTGCTTCATTGATGCGGGGTTCATATGACAGTGCTGGAATTGGTAGTAATGGTTCCGGAGTCACAGCTGAACAGGTGAACAATCTAGTGTCTAATTTAAATATGTTGGAACAAGTTGGAAACTCTGAAATGAGTCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCGATAATAGACTTTGTTAAGGCTCTATGCAAGGTCTCCATGGAGGAATTGAGATCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCTGATTTCTTTGTAACTATTGGCTGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCATTGCGTCAGTTGTCAATGAAATTTCTGGAGCGAGAAGAGCTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAATTAATTATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTCAACAATGTCAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCTTACGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAAATTATTCGTGATTACTTTCCATACATCACTGAGACTGAAACCACAACCTTCACAGACTGTGTAAATTGTCTAATTGCGTTTACCAATAGTAGATTCAATAAAGAGATTAGCCTAAACGCCATTGCTTTTCTTCGGTTCTGTGCAACAAAACTTGCAGCTGGAGACCTTGGCTCATCATCAAGGAATAAGGATAAGGAAGTTTCTGGAAAAGTTTCCTTATCTTCTCCTCAAACAGGTAAGGAGGGGAAAAATGATAATGGAGAGGCTGCTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTATCCGAGCTTAGCTTTGAGCCAAGACCTGAGATTAGGAAGAGCGCCTTGGAAGTCCTGTTTGAAACCTTACGTAACCATGGCCATCTGTTTTCACTTCCTTTATGGGAAAGAGTATTTGAGTCTATCCTATTTCCTATATTCGATTATGTTCGGCATGCTATTGATCCTTCAGGAAATAGTTCACCAGTCAATATAGAGCCTGGTGATGGTGAGGTTGATCAAGATGCTTGGCTTTTTGAGACATGCACATTGGCCCTCCAATTGGTCGTAGATCTTTTTGTTAACTTTTACAATTGTGTCAATCCACTTTTAAGAAAGGTGCTGATGCTCCTGGTTAACTTCATAAATCGCCCTCATCAAAGCCTCGCGGGCATTGGTATTGCTGCTTTTGTTCGTTTGATGAGTAATGCGGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGAAGCAGCAAATGCAACACTTCCTAACTTTTTGTTTCTGGATAGCGAGGATGAACATGCTTCAACTGCTGAAGATGATACAGATTTTGCTGATTCTGGCTTCCCAAATGATTTAGTAAACTTGAGGACTCATCGTCTTTATGCTCATTTAACTGATGCAAAATGCCGAGCTGCTGTTCAGCTTTTATTGATTCAGGCGGTGACGGAGATCTATAACATGCATCGTTCTCACCTTTCAGCAAAAGCCATGCTAGTGCTGTATGATGCTTTGCACGATATTGCTTTACACGCACATCAGATTAACAACAATACCATATTACGTTCAAAACTTCAAGAGTTTGGTTCTATGAGCCAAATGCAAGACCCTCCACTCTTACGCCTTGAGAATGAATCGTACCAGATCTGCCTTACATTTTTACAAAACCTTGTCATTGACAAACCTCCTAGTTATGACGCCGATGAGGTTGAATCTCATCTCATTCGGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTCGCGGGTTTTGGACAAAAATCTGAATCTTCTCATGGTCGGGAACCACATTGGTTTATTCCCTTGGGCTCTGGCAAGAGTAGGGAGTTGGCTGCTCGTTCACCTCTCATTGTGGCTACTCTGCACGCTATTTGTAGTTTGGAAGATACTTCCTTTGAGAAGAACCTGTCTCATTTCTTCCCTCTTATTTCTAGCTTGGTACGTTGTGAACATGGGTCCAAGGACGTCCAGGTTGCTCTCAGTGACATGCTTAATTTATCAGTTGGTCCTGTTTTGCTACAGTCATGTTGA 5508 0.4343 MASSEADSRLSLVVVPALEKIIKNASWRKHAKLTHECKSVIERLGHRHFPPPGSPTDTEPETNVPGPLHDGGPVEFSLAESESILAPLIHAAGSGVLKIADPAVDAIQKLIAHGYLRGEVDPDSAAAAPEARLLSNLIESVCKCHDFGDESMELLLLKTLLSAVTSISLRIHGDSLLLIVRTCYDIYLESKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPVEKSDGDNSMTQFVQGFITKIMQDIDGVLNPTMPSGKVHLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVDRDDDLEVQIGNKLRRDAFLVFRALCKLSMKTLPKEAIGDPELMKGKIVALELLKILLENAGAVFRTSERSELDLHCLDVLSRSEHGDLIAFSGCSYEKNSLVKALRGKGGLCLFSSINVLTSRNMTWFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEATLKLESMKSLVAVLKSMGDWMNKQLRIPDPHSAKKVEALDYSPETGGFTMVNGNGEDAVDGSDTQSEASNDASDVSNIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGDSPEDIATFLKEASGLNKTLIGDYLGEREELPLKVMHAYVDSFNFQGMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAEHYCKCNSKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGEDLPEEYLKSLFDRISRNEIKMKENDVTPQQKQAVNPNRLLGLDSILNIVIRKHDEENLETSDDLIRHMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVVISLCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNVNAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKAKQTKSTILPVLKKKGPGRMQYAAASLMRGSYDSAGIGSNGSGVTAEQVNNLVSNLNMLEQVGNSEMSRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLGSSSRNKDKEVSGKVSLSSPQTGKEGKNDNGEAADKDDHLYFWFPLLAGLSELSFEPRPEIRKSALEVLFETLRNHGHLFSLPLWERVFESILFPIFDYVRHAIDPSGNSSPVNIEPGDGEVDQDAWLFETCTLALQLVVDLFVNFYNCVNPLLRKVLMLLVNFINRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAANATLPNFLFLDSEDEHASTAEDDTDFADSGFPNDLVNLRTHRLYAHLTDAKCRAAVQLLLIQAVTEIYNMHRSHLSAKAMLVLYDALHDIALHAHQINNNTILRSKLQEFGSMSQMQDPPLLRLENESYQICLTFLQNLVIDKPPSYDADEVESHLIRLCQEVLEFYIEVAGFGQKSESSHGREPHWFIPLGSGKSRELAARSPLIVATLHAICSLEDTSFEKNLSHFFPLISSLVRCEHGSKDVQVALSDMLNLSVGPVLLQSC 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01683 1835 Gene3D - 667 748 - -
Spst4g01683 1835 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 73 1700 - -
Spst4g01683 1835 MobiDBLite consensus disorder prediction 1363 1396 - -
Spst4g01683 1835 Pfam Domain of unknown function (DUF1981) 1224 1306 IPR015403 -
Spst4g01683 1835 MobiDBLite consensus disorder prediction 45 64 - -
Spst4g01683 1835 MobiDBLite consensus disorder prediction 649 666 - -
Spst4g01683 1835 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 346 562 IPR032691 -
Spst4g01683 1835 Pfam Sec7 domain 676 857 IPR000904 GO:0005085|GO:0032012
Spst4g01683 1835 Pfam BIG2 C-terminal domain 1626 1823 IPR046455 -
Spst4g01683 1835 SUPERFAMILY ARM repeat 465 1570 IPR016024 -
Spst4g01683 1835 Gene3D - 749 865 IPR023394 -
Spst4g01683 1835 MobiDBLite consensus disorder prediction 641 666 - -
Spst4g01683 1835 CDD Sec7 675 857 IPR000904 GO:0005085|GO:0032012
Spst4g01683 1835 Pfam C-terminal region of Mon2 protein 1405 1466 IPR032817 -
Spst4g01683 1835 SMART sec7_5 672 857 IPR000904 GO:0005085|GO:0032012
Spst4g01683 1835 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 658 748 - -
Spst4g01683 1835 ProSiteProfiles SEC7 domain profile. 668 855 IPR000904 GO:0005085|GO:0032012
Spst4g01683 1835 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 750 868 - -
Spst4g01683 1835 SUPERFAMILY Sec7 domain 672 865 IPR035999 GO:0005085|GO:0032012
Spst4g01683 1835 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 217 IPR032629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01683 Spst-Chr4 56547639 56562533 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01683 K18442 - gmx:100783833 3125.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00959 1 11801977 11806131 Spst4g01683 4 56547639 56562533 PCT