Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01661 ATGGCTAATTGGTCCCCTGAAAATGCCAAGAGAGCTTATCTCCAAGCACTCAAAATGGCCAAAAGAGATAAAGAACCTGATGTAGCTGAGTTCATATCTGCTCTTGCAGCAGGCAACAATGCACAACTCATGATGGTGGCCGGTGCTGGTGTGGCCGGTTCCGCCACGCTTGCTCTGGCTGCAGCTGCTCATCAAACTGGTGGTCGTGTGGTATGCGTATGTTGTGACCAAATAGAGACACGTGCATTGAGAAAAGATCTTGGAGTTTATGGAGATCGTGTTGAGTTTGTTGTAGGAGATGTGAGAAGGCTTCTGCTAGGCGATTACAAAGGAGCTGATTTTGTGCTTGTGGATTGTGACATCACTAATGCAAGGGAAGTTTTTCTAGCAGCATTTAAAGGGGCCAACAAAGATGGTGCCCTTGTGGTTGGATATAATGTTAAGCATAGGGCCTCAAGATGGAGACAACTAAGAGCATCATTTCTACCCATTGGAGAAGGGTTGTTGGTGGCCAAAATAGATCCAAATGTGAAGGGTAATGACAGGGTTGTCCAAAGGAGGAGTCGTTGGATTGTTCAAGTGGACAACTGCACTGGAGAGGAACATATTTTTAGGGTCACCCCTCCTCATAAGAAAGTGCAGATTGAAGTCTAA 654 0.4587 MANWSPENAKRAYLQALKMAKRDKEPDVAEFISALAAGNNAQLMMVAGAGVAGSATLALAAAAHQTGGRVVCVCCDQIETRALRKDLGVYGDRVEFVVGDVRRLLLGDYKGADFVLVDCDITNAREVFLAAFKGANKDGALVVGYNVKHRASRWRQLRASFLPIGEGLLVAKIDPNVKGNDRVVQRRSRWIVQVDNCTGEEHIFRVTPPHKKVQIEV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01661 217 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 171 IPR029063 -
Spst4g01661 217 PANTHER DUF1442 FAMILY PROTEIN 1 205 IPR009902 -
Spst4g01661 217 Gene3D Vaccinia Virus protein VP39 5 176 IPR029063 -
Spst4g01661 217 Pfam Protein of unknown function (DUF1442) 4 205 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01661 Spst-Chr4 56352853 56353961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01661 - - pvu:PHAVU_010G083400g 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01661 4 56352853 56353961 Spst4g01661 4 56352853 56353961 ECH
Spst4g01661 4 56352853 56353961 Spst10g00312 10 3134831 3135634 PCT